RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 TBX3O15119 743 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 PRPF3O43395 683 aaKnown RBP11.46□□□□□ -0.57
TRAV33-201ENST00000557514 TRAPPC3O43617 180 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 SLC37A4O43826 429 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 RHOBTB1O94844 696 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 MYL4P12829 197 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 GLRA2P23416 452 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 ARL2P36404 184 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 CLCNKBP51801 687 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 FGD1P98174 961 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 TWF1Q12792 350 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 UPP1Q16831 310 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 COL28A1Q2UY09 1125 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 ARHGAP29Q52LW3 1261 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 XKR9Q5GH70 373 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 TPGS2Q68CL5 300 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 C19orf48Q6RUI8 117 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 OTUD6AQ7L8S5 288 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 TMC8Q8IU68 726 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 PRIMPOLQ96LW4 560 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
TRAV33-201ENST00000557514 C22orf23Q9BZE7 217 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 PDZD7Q9H5P4 517 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 CACNA2D2Q9NY47 1150 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 VPS54Q9P1Q0 977 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 ANKFY1Q9P2R3 1169 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.57
TRAV33-201ENST00000557514 SPAG17Q6Q759 2223 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 KHNYNO15037 678 aaKnown RBP11.45□□□□□ -0.58
TRAV33-201ENST00000557514 DCLK1O15075 740 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 ATG13O75143 517 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 BRCC3P46736 316 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 TNK2Q07912 1038 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 TMEM196Q5HYL7 178 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 PMS2CLQ68D20 193 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 FSTL4Q6MZW2 842 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 HAUS6Q7Z4H7 955 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 TTC8Q8TAM2 541 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 ADAM32Q8TC27 787 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 ZNF512Q96ME7 567 aaPredicted RBP11.45□□□□□ -0.58
TRAV33-201ENST00000557514 UROC1Q96N76 676 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 HHIPQ96QV1 700 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 TMEM209Q96SK2 561 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 LRRC3Q9BY71 257 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 ZSWIM4Q9H7M6 989 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 OBP2AQ9NY56 170 aa11.45□□□□□ -0.58
TRAV33-201ENST00000557514 DDX25Q9UHL0 483 aaKnown RBP11.45□□□□□ -0.58
TRAV33-201ENST00000557514 A0A1W2PRU2 124 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 PATE3B3GLJ2 98 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 SYN3O14994 580 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 ZBTB39O15060 712 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 ARPP19P56211 112 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 MRPL58Q14197 206 aaKnown RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 EPHA7Q15375 998 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 FAM187BQ17R55 369 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 STXBP5Q5T5C0 1151 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 DHX32Q7L7V1 743 aaKnown RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 ARID3BQ8IVW6 561 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 CHFRQ96EP1 664 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 FAM20AQ96MK3 541 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 PRMT7Q9NVM4 692 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 POLR3BQ9NW08 1133 aaPredicted RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 RGL1Q9NZL6 768 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 EBF1Q9UH73 591 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 AFF4Q9UHB7 1163 aaKnown RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 FBXL5Q9UKA1 691 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 MAFFQ9ULX9 164 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 YIPF1Q9Y548 306 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 ACACAQ13085 2346 aa11.44□□□□□ -0.58
TRAV33-201ENST00000557514 TDRD15B5MCY1 1934 aaKnown RBP11.44□□□□□ -0.58
TRAV33-201ENST00000557514 ZNF462Q96JM2 2506 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 SPAARA0A1B0GVQ0 90 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 H0Y626 953 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 M0R2N6 131 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 N4BP3O15049 544 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 RNF40O75150 1001 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 DGAT1O75907 488 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 TRIM16O95361 564 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 APBB3O95704 486 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 SIM1P81133 766 aaPredicted RBP11.43□□□□□ -0.58
TRAV33-201ENST00000557514 GRSF1Q12849 480 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRAV33-201ENST00000557514 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 CYP2U1Q7Z449 544 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 PIP4P1Q86T03 277 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 C11orf74Q86VG3 221 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 NOSTRINQ8IVI9 506 aa11.43□□□□□ -0.58
TRAV33-201ENST00000557514 POLR3FQ9H1D9 316 aaPredicted RBP11.43□□□□□ -0.58
TRAV33-201ENST00000557514 FZD8Q9H461 694 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms