RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RNF26Q9BY78 433 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 OSBPL6Q9BZF3 934 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 TGIF2Q9GZN2 237 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 NXF3Q9H4D5 531 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 NCOA5Q9HCD5 579 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 PARD6AQ9NPB6 346 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 LTB4R2Q9NPC1 389 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ZSCAN32Q9NX65 697 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 MAGEC2Q9UBF1 373 aaPredicted RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 ADAM28Q9UKQ2 775 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 VAV3Q9UKW4 847 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 CDV3Q9UKY7 258 aaKnown RBP6.5□□□□□ -1.37
VPS33B-207ENST00000557470 USP18Q9UMW8 372 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 MIA3Q5JRA6 1907 aa6.5□□□□□ -1.37
VPS33B-207ENST00000557470 SF3B1O75533 1304 aaKnown RBP eCLIP6.5□□□□□ -1.378e-6■■■■■ 107
VPS33B-207ENST00000557470 CEP295Q9C0D2 2601 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 MTCL1Q9Y4B5 1905 aaKnown RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PRR5-ARHGAP8B1AHC4 643 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 INO80B-WBP1J3KQ70 363 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 M0R2N6 131 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ZBTB39O15060 712 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ADAM12O43184 909 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 B4GALT5O43286 388 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 C8AP07357 584 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 HNRNPA1P09651 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 BMP2P12643 396 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 IFNAR1P17181 557 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ARF4P18085 180 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 SDHBP21912 280 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 TARSP26639 723 aaKnown RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 AXLP30530 894 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 HOXA9P31269 272 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PTENP60484 403 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ARHGAP8P85298 464 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PFKPQ01813 784 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 MBTD1Q05BQ5 628 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 GRIK3Q13003 919 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 CBLBQ13191 982 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PPP2R5CQ13362 524 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ZNF211Q13398 564 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 HSP90AA2PQ14568 343 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PCBP1Q15365 356 aaKnown RBP eCLIP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 NPY5RQ15761 445 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ST3GAL2Q16842 350 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 INF2Q27J81 1249 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PPM1LQ5SGD2 360 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ZBTB41Q5SVQ8 909 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 LIN9Q5TKA1 542 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 TPRG1Q6ZUI0 275 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 CDR2LQ86X02 465 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ANKMY2Q8IV38 441 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 NPAS3Q8IXF0 933 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ADAM32Q8TC27 787 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 HASPINQ8TF76 798 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 TCP11Q8WWU5 503 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 SECISBP2LQ93073 1101 aaKnown RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 CLDN23Q96B33 292 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 BORCS6Q96GS4 357 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 JAKMIP1Q96N16 626 aaKnown RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 CLSTN3Q9BQT9 956 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PAAF1Q9BRP4 392 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 LXNQ9BS40 222 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 RTKNQ9BST9 563 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PHF20Q9BVI0 1012 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 C22orf23Q9BZE7 217 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 TRIM6Q9C030 488 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 BRINP2Q9C0B6 783 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 ZSWIM4Q9H7M6 989 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 KCNMB3Q9NPA1 279 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PRMT8Q9NR22 394 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 SH3GLB2Q9NR46 395 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 HCFC1R1Q9NWW0 138 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 RGL1Q9NZL6 768 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 KLK14Q9P0G3 267 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 DDX25Q9UHL0 483 aaKnown RBP6.49□□□□□ -1.37
VPS33B-207ENST00000557470 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 POLIQ9UNA4 740 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
VPS33B-207ENST00000557470 TDRD15B5MCY1 1934 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 CASTOR2A6NHX0 329 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 SHISA7A6NL88 538 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 H3BM21 787 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 ASAP2O43150 1006 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 XYLBO75191 536 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 TADA2AO75478 443 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 KIF4AO95239 1232 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 NPTXRO95502 500 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 P4HBP07237 508 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 ADRB1P08588 477 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 TDGF1P13385 188 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 YWHABP31946 246 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 GMPRP36959 345 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 MAGEA9P43362 315 aa6.48□□□□□ -1.37
VPS33B-207ENST00000557470 RPS9P46781 194 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 MCCD1P59942 119 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 CCT2P78371 535 aaKnown RBP6.48□□□□□ -1.37
VPS33B-207ENST00000557470 IRX6P78412 446 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms