RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ZDBF2Q9HCK1 2354 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 MED19A0JLT2 244 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 H3BS24 57 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 GCOM1H8Y6P7 765 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 NRDCO43847 1150 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 STAM2O75886 525 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 HTR3BO95264 441 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 POLR2MP0CAP2 368 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 CD8BP10966 210 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 CCND2P30279 289 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 TECP42680 631 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 NT5C2P49902 561 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 ERVFC1P60507 584 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 MGAT3Q09327 533 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 PUM1Q14671 1186 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 PGM5Q15124 567 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 QRICH1Q2TAL8 776 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 L1TD1Q5T7N2 865 aaKnown RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 VPS53Q5VIR6 699 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 METTL7BQ6UX53 244 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 GK5Q6ZS86 529 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 TSHZ1Q6ZSZ6 1077 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 REC114Q7Z4M0 266 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 VN1R2Q8NFZ6 395 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 RASGRP4Q8TDF6 673 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 KCNG4Q8TDN1 519 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 LMBR1Q8WVP7 490 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 RNF34Q969K3 372 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 RMDN1Q96DB5 314 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 HSPA12BQ96MM6 686 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 NECTIN4Q96NY8 510 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 GPR20Q99678 358 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 SPON2Q9BUD6 331 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 RNF41Q9H4P4 317 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 JMJD4Q9H9V9 463 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 BRMS1Q9HCU9 246 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 ZSWIM5Q9P217 1185 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 PUF60Q9UHX1 559 aaKnown RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 PCDHB14Q9Y5E9 798 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 WDFY4Q6ZS81 3184 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 COL4A4P53420 1690 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-247ENST00000557311 CACNA1HO95180 2353 aa5.56□□□□□ -1.52
ATXN3-247ENST00000557311 CCDC171Q6TFL3 1326 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 CHURC1-FNTBB4DL54 471 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 KRT37O76014 449 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 FGF18O76093 207 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 LMNAP02545 664 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 CD52P31358 61 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 ITIH3Q06033 890 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 TRAF1Q13077 416 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 KCNC3Q14003 757 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 PAN2Q504Q3 1202 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 ASPRV1Q53RT3 343 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 SPOUT1Q5T280 376 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 FBXW10Q5XX13 1052 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 CES5AQ6NT32 575 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 RUFY4Q6ZNE9 571 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 ZDHHC14Q8IZN3 488 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 ESR2Q92731 530 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 CASP10Q92851 521 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 NKD1Q969G9 470 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 SENP7Q9BQF6 1050 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 RTP3Q9BQQ7 232 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 ADAM7Q9H2U9 754 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 BCAS3Q9H6U6 928 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 KAT14Q9H8E8 782 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 AGO3Q9H9G7 860 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 NGRNQ9NPE2 291 aaKnown RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 LZTS1Q9Y250 596 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 POLR3KQ9Y2Y1 108 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-247ENST00000557311 PCDHB7Q9Y5E2 793 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 PCDHA1Q9Y5I3 950 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 SNX11Q9Y5W9 270 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 CDY2AQ9Y6F7 541 aa5.55□□□□□ -1.52
ATXN3-247ENST00000557311 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 CACNA1AO00555 2505 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 BAZ2AQ9UIF9 1905 aaKnown RBP5.54□□□□□ -1.52
ATXN3-247ENST00000557311 MBLAC1A4D2B0 266 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-247ENST00000557311 RRN3P2A6NIE6 340 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 C2CD4DB7Z1M9 353 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 ZBTB5O15062 677 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 FIBPO43427 364 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 SCG2P13521 617 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 AOC1P19801 751 aa5.54□□□□□ -1.52
ATXN3-247ENST00000557311 SP100P23497 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-247ENST00000557311 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms