RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SPTBN2O15020 2390 aa16.16■□□□□ 0.18
CHD8-211ENST00000556833 NCOR2Q9Y618 2525 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 ARHGEF37A1IGU5 675 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 ECI2O75521 394 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 ABLIM3O94929 683 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 VIPR2P41587 438 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 HMGN5P82970 282 aaKnown RBP16.15■□□□□ 0.18
CHD8-211ENST00000556833 NOLC1Q14978 699 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHD8-211ENST00000556833 LPAL2Q16609 132 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 XKR4Q5GH76 650 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 RNF19BQ6ZMZ0 732 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 C1orf186Q6ZWK4 172 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 RAB34Q9BZG1 259 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 GDE1Q9NZC3 331 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 CNTN3Q9P232 1028 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 NCANO14594 1321 aa16.15■□□□□ 0.18
CHD8-211ENST00000556833 KIF26AQ9ULI4 1882 aaPredicted RBP16.14■□□□□ 0.17
CHD8-211ENST00000556833 H7C4K7 107 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ATF2P15336 505 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 KCNE1P15382 129 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 PROZP22891 400 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 GDI1P31150 447 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 STRN3Q13033 797 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 SLC10A6Q3KNW5 377 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ZNF280DQ6N043 979 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ZNF852Q6ZMS4 543 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 DTHD1Q6ZMT9 781 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ELMOD1Q8N336 334 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 DDX12PQ92771 950 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ELSPBP1Q96BH3 223 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 BICD1Q96G01 975 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 SUSD3Q96L08 255 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 SLITRK6Q9H5Y7 841 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 ZFP14Q9HCL3 533 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 CEP72Q9P209 647 aa16.14■□□□□ 0.17
CHD8-211ENST00000556833 SHISA7A6NL88 538 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 SYN3O14994 580 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 TBC1D4O60343 1298 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 TNFSF9P41273 254 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 MTAPQ13126 283 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 PDIA5Q14554 519 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
CHD8-211ENST00000556833 TEAD2Q15562 447 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 RSPO4Q2I0M5 234 aaPredicted RBP16.13■□□□□ 0.17
CHD8-211ENST00000556833 CYP4A22Q5TCH4 519 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 VITQ6UXI7 678 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 TCEAL8Q8IYN2 117 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 TTC8Q8TAM2 541 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 HAPLN2Q9GZV7 340 aa16.13■□□□□ 0.17
CHD8-211ENST00000556833 SMG5Q9UPR3 1016 aaKnown RBP16.13■□□□□ 0.17
CHD8-211ENST00000556833 TSC2P49815 1807 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 VWA3AA6NCI4 1184 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 MOSPD3O75425 235 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 SOAT2O75908 522 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 MAPTP10636 758 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.17
CHD8-211ENST00000556833 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 MRPL58Q14197 206 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 STXBP5Q5T5C0 1151 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 IQCEQ6IPM2 695 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 TMEM161BQ8NDZ6 487 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 ZSCAN18Q8TBC5 510 aaPredicted RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 FAM212AQ96EL1 285 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 ZSCAN31Q96LW9 406 aaPredicted RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 ZNF512Q96ME7 567 aaPredicted RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 ASB16Q96NS5 453 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 TRMT61BQ9BVS5 477 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 ASAH2Q9NR71 780 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 FBXO4Q9UKT5 387 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
CHD8-211ENST00000556833 YIPF1Q9Y548 306 aa16.12■□□□□ 0.17
CHD8-211ENST00000556833 TCHHQ07283 1943 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 TULP1O00294 542 aaPredicted RBP16.11■□□□□ 0.17
CHD8-211ENST00000556833 ZNF197O14709 1029 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 PPEF2O14830 753 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 TOM1L1O75674 476 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 VNN2O95498 520 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 PLS3P13797 630 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 FZD5Q13467 585 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 RTL10Q7L3V2 364 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 TTC9BQ8N6N2 239 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 APPL2Q8NEU8 664 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 SHKBP1Q8TBC3 707 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 CLDN23Q96B33 292 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 CDK5RAP3Q96JB5 506 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 KIF2CQ99661 725 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 OSBPL6Q9BZF3 934 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 CRISPLD1Q9H336 500 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 AVENQ9NQS1 362 aaPredicted RBP16.11■□□□□ 0.17
CHD8-211ENST00000556833 SH2B1Q9NRF2 756 aaPredicted RBP16.11■□□□□ 0.17
CHD8-211ENST00000556833 ZSCAN32Q9NX65 697 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 AFF4Q9UHB7 1163 aaKnown RBP16.11■□□□□ 0.17
CHD8-211ENST00000556833 USP18Q9UMW8 372 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms