RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 TMEM176AQ96HP8 235 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 CDHR1Q96JP9 859 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 LPIN3Q9BQK8 851 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SDF4Q9BRK5 362 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 FDXACB1Q9BRP7 624 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 GCOM2Q9BZD3 368 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 LRRC4CQ9HCJ2 640 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF302Q9NR11 478 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 KIAA1522Q9P206 1035 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 KANSL3Q9P2N6 904 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 PLEKHB1Q9UF11 243 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-242ENST00000556644 BTBD3Q9Y2F9 522 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 HES2Q9Y543 173 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 UBIAD1Q9Y5Z9 338 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 CDY1Q9Y6F8 540 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 LRBAP50851 2863 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 NF1P21359 2839 aa4.77□□□□□ -1.65
ATXN3-242ENST00000556644 SF3B1O75533 1304 aaKnown RBP eCLIP4.76□□□□□ -1.654e-12■■■■■ 275.7
ATXN3-242ENST00000556644 NEDD4P46934 1319 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 CNTNAP2Q9UHC6 1331 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 OTOL1A6NHN0 477 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 CASTOR2A6NHX0 329 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KLRF2D3W0D1 207 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 DPYSL4O14531 572 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF197O14709 1029 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 NR1I2O75469 434 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 DKK1O94907 266 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KIF4AO95239 1232 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 PRAMEF12O95522 483 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 AFPP02771 609 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 PRKCBP05771 671 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SYPP08247 313 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 FGRP09769 529 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ITGA4P13612 1032 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 HNRNPLP14866 589 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KIF5BP33176 963 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 P2RY2P41231 377 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SLC26A2P50443 739 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ARPP19P56211 112 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 GRIK2Q13002 908 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SLC14A1Q13336 389 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 RAB33AQ14088 237 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SMAD1Q15797 465 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 IGFBP7Q16270 282 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 UBE2SQ16763 222 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 PLEKHG6Q3KR16 790 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ARHGAP29Q52LW3 1261 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 UBXN11Q5T124 520 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 C6orf118Q5T5N4 469 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 CYP4A22Q5TCH4 519 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 PEAR1Q5VY43 1037 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 TRIM68Q6AZZ1 485 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF787Q6DD87 383 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ZNF746Q6NUN9 644 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 HAUS6Q7Z4H7 955 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 RASSF3Q86WH2 238 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ERICH1Q86X53 443 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SAMD3Q8N6K7 520 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 EXD3Q8N9H8 876 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SMG8Q8ND04 991 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 CEP76Q8TAP6 659 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 RHBDD1Q8TEB9 315 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 FGF11Q92914 225 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ACDQ96AP0 544 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 MTMR8Q96EF0 704 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SPACA7Q96KW9 195 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 CNOT6LQ96LI5 555 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 TTC14Q96N46 770 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 POLR3CQ9BUI4 534 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 TRAIPQ9BWF2 469 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SMG9Q9H0W8 520 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 TRPV4Q9HBA0 871 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 AVENQ9NQS1 362 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KCNH7Q9NS40 1196 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 BCCIPQ9P287 314 aaKnown RBP eCLIP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 DAXXQ9UER7 740 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 SEPT3Q9UH03 358 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 ANAPC4Q9UJX5 808 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 FNDC3AQ9Y2H6 1198 aaKnown RBP4.76□□□□□ -1.65
ATXN3-242ENST00000556644 NID2Q14112 1375 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 KNTC1P50748 2209 aa4.76□□□□□ -1.65
ATXN3-242ENST00000556644 BAZ2BQ9UIF8 2168 aaKnown RBP4.75□□□□□ -1.65
ATXN3-242ENST00000556644 IGKV6D-21A0A0A0MT36 114 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 A0A1W2PRU2 124 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 CLEC18AA5D8T8 446 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 TRDMT1O14717 391 aaKnown RBP4.75□□□□□ -1.65
ATXN3-242ENST00000556644 MEIS2O14770 477 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 MAGEB2O15479 319 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 SUV39H1O43463 412 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 SMARCA5O60264 1052 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-242ENST00000556644 SEC24AO95486 1093 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 ZFYP08048 801 aaPredicted RBP4.75□□□□□ -1.65
ATXN3-242ENST00000556644 JUPP14923 745 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 ARSAP15289 507 aa4.75□□□□□ -1.65
ATXN3-242ENST00000556644 IGFBP6P24592 240 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms