RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CNR2P34972 360 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 C1orf228Q6PIY5 440 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 VITQ6UXI7 678 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 SPEM1Q8N4L4 309 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 GPR88Q9GZN0 384 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 TRPV4Q9HBA0 871 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 AFF4Q9UHB7 1163 aaKnown RBP13.03□□□□□ -0.32
ACTN1-221ENST00000556571 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
ACTN1-221ENST00000556571 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.03□□□□□ -0.32
ACTN1-221ENST00000556571 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 NRG2O14511 850 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 FOXD2O60548 495 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 MOSPD3O75425 235 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 CHRNB1P11230 501 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 KCNE1P15382 129 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 VIPR2P41587 438 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 EPHA5P54756 1037 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 SIM2Q14190 667 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 CSRP2Q16527 193 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 ST3GAL2Q16842 350 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 HAUS3Q68CZ6 603 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 ZNF280DQ6N043 979 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 CEP120Q8N960 986 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 NECAB1Q8N987 351 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 APPL2Q8NEU8 664 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 ZSCAN18Q8TBC5 510 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 MSANTD3Q96H12 275 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
ACTN1-221ENST00000556571 CDT1Q9H211 546 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 PTPRHQ9HD43 1115 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 ASAH2Q9NR71 780 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 CEP72Q9P209 647 aa13.02□□□□□ -0.33
ACTN1-221ENST00000556571 HRO43593 1189 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 MYL4P12829 197 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 CCNE1P24864 410 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 OSTNP61366 133 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 SATB1Q01826 763 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 TWF1Q12792 350 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 PTGDRQ13258 359 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-221ENST00000556571 LRRC32Q14392 662 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 ME3Q16798 604 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 ZNF568Q3ZCX4 644 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 HS6ST3Q8IZP7 471 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 SUSD3Q96L08 255 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 ZMAT2Q96NC0 199 aaKnown RBP13.01□□□□□ -0.33
ACTN1-221ENST00000556571 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 MRPL4Q9BYD3 311 aaKnown RBP13.01□□□□□ -0.33
ACTN1-221ENST00000556571 BHMT2Q9H2M3 363 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-221ENST00000556571 PHLPP2Q6ZVD8 1323 aa13.01□□□□□ -0.33
ACTN1-221ENST00000556571 CHD6Q8TD26 2715 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 CCDC169A6NNP5 214 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 HEPACAM2A8MVW5 462 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 CHURC1-FNTBB4DL54 471 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 ARNTLO00327 626 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 CHADO15335 359 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 MCF2P10911 925 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 FNTBP49356 437 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 FOSBP53539 338 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 ANAPC15P60006 121 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 GAS6Q14393 721 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
ACTN1-221ENST00000556571 PRR23CQ6ZRP0 262 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 LONP2Q86WA8 852 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 YAF2Q8IY57 180 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 TCHPQ9BT92 498 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 SLITRK6Q9H5Y7 841 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 TMEM134Q9H6X4 195 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 CNTN3Q9P232 1028 aa13□□□□□ -0.33
ACTN1-221ENST00000556571 RBM19Q9Y4C8 960 aaKnown RBP13□□□□□ -0.33
ACTN1-221ENST00000556571 USP24Q9UPU5 2620 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 JAK2O60674 1132 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 CPB1P15086 417 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 GJA1P17302 382 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 MCM4P33991 863 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 CCT6AP40227 531 aaKnown RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 NPTX2P47972 431 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 KPNA1P52294 538 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 PEX3P56589 373 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 DMP1Q13316 513 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-221ENST00000556571 PLD1Q13393 1074 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 TEAD2Q15562 447 aa12.99□□□□□ -0.33
ACTN1-221ENST00000556571 ZNF174Q15697 407 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms