RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TRAK2O60296 914 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 SEC24AO95486 1093 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 SCP2P22307 547 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 ZNF131P52739 623 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 CUL4AQ13619 759 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 ANGPT1Q15389 498 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 TPGS2Q68CL5 300 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 ZNF280DQ6N043 979 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 TCEAL8Q8IYN2 117 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 MCRS1Q96EZ8 462 aa24.61■■□□□ 1.53
ACTN1-220ENST00000556433 UBQLN1Q9UMX0 589 aaKnown RBP24.61■■□□□ 1.53
ACTN1-220ENST00000556433 LACTBL1A8MY62 500 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 PIGRP01833 764 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 LRPAP1P30533 357 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 PPP2R3AQ06190 1150 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 ZBTB6Q15916 424 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 SLC5A9Q2M3M2 681 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 ZBTB41Q5SVQ8 909 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 FRMD5Q7Z6J6 570 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 KXD1Q9BQD3 176 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 CORO1BQ9BR76 489 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 RPF1Q9H9Y2 349 aaKnown RBP24.6■■□□□ 1.53
ACTN1-220ENST00000556433 AVENQ9NQS1 362 aaPredicted RBP24.6■■□□□ 1.53
ACTN1-220ENST00000556433 SIT1Q9Y3P8 196 aa24.6■■□□□ 1.53
ACTN1-220ENST00000556433 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.6■■□□□ 1.53
ACTN1-220ENST00000556433 OGTO15294 1046 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 TBCAO75347 108 aaKnown RBP24.59■■□□□ 1.53
ACTN1-220ENST00000556433 CYP3A5P20815 502 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 DDIT3P35638 169 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 SPECC1Q5M775 1068 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 ASCL5Q7RTU5 278 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 LARP4BQ92615 738 aaKnown RBP24.59■■□□□ 1.53
ACTN1-220ENST00000556433 SHDQ96IW2 340 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 CCSER1Q9C0I3 900 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 GDE1Q9NZC3 331 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 AFF4Q9UHB7 1163 aaKnown RBP24.59■■□□□ 1.53
ACTN1-220ENST00000556433 INSL5Q9Y5Q6 135 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 CLIC4Q9Y696 253 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 NOTCH4Q99466 2003 aa24.59■■□□□ 1.53
ACTN1-220ENST00000556433 M0QZQ0 153 aa24.58■■□□□ 1.53
ACTN1-220ENST00000556433 XPOTO43592 962 aaKnown RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 DCNP07585 359 aaKnown RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 PDCP20941 246 aa24.58■■□□□ 1.53
ACTN1-220ENST00000556433 NMT1P30419 496 aaKnown RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 ADCY1Q08828 1119 aa24.58■■□□□ 1.53
ACTN1-220ENST00000556433 SNW1Q13573 536 aaKnown RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 ENOX2Q16206 610 aaKnown RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 FAM212AQ96EL1 285 aa24.58■■□□□ 1.53
ACTN1-220ENST00000556433 MSTO1Q9BUK6 570 aa24.58■■□□□ 1.53
ACTN1-220ENST00000556433 TIMM13Q9Y5L4 95 aaPredicted RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 PTPRZ1P23471 2315 aaPredicted RBP24.58■■□□□ 1.53
ACTN1-220ENST00000556433 A0A0B4J269 797 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 FAM189A1O60320 539 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 CPB1P15086 417 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 GUCY2FP51841 1108 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 STARD6P59095 220 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 GTF2BQ00403 316 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 YWHAHQ04917 246 aaPredicted RBP24.57■■□□□ 1.52
ACTN1-220ENST00000556433 SLC44A4Q53GD3 710 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 DSTYKQ6XUX3 929 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 USP49Q70CQ1 688 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 EPSTI1Q96J88 318 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 TSPAN18Q96SJ8 248 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 FIZ1Q96SL8 496 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 FOXQ1Q9C009 403 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 MAFFQ9ULX9 164 aa24.57■■□□□ 1.52
ACTN1-220ENST00000556433 ZNF197O14709 1029 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 OAZ2O95190 189 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 ADRB2P07550 413 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 CEBPBP17676 345 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 ABCD1P33897 745 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 PFKPQ01813 784 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 IQCEQ6IPM2 695 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 SLC39A4Q6P5W5 647 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 POTEHQ6S545 545 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 RNF19BQ6ZMZ0 732 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 USP37Q86T82 979 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 ELMOD1Q8N336 334 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 KRI1Q8N9T8 703 aaKnown RBP24.56■■□□□ 1.52
ACTN1-220ENST00000556433 NKD2Q969F2 451 aaPredicted RBP24.56■■□□□ 1.52
ACTN1-220ENST00000556433 TCEAL4Q96EI5 215 aa24.56■■□□□ 1.52
ACTN1-220ENST00000556433 ZNF512Q96ME7 567 aaPredicted RBP24.56■■□□□ 1.52
ACTN1-220ENST00000556433 PRR23AA6NEV1 266 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 ECI2O75521 394 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 TWF1Q12792 350 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 PTPAQ15257 358 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 MLF2Q15773 248 aaPredicted RBP24.55■■□□□ 1.52
ACTN1-220ENST00000556433 ZC2HC1CQ53FD0 456 aaPredicted RBP24.55■■□□□ 1.52
ACTN1-220ENST00000556433 PRSS36Q5K4E3 855 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 CYP4A22Q5TCH4 519 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 SPATA1Q5VX52 437 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 PDZD4Q76G19 769 aaPredicted RBP24.55■■□□□ 1.52
ACTN1-220ENST00000556433 CD302Q8IX05 232 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 PLA2G2FQ9BZM2 168 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 DLGAP2Q9P1A6 1054 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 CCDC39Q9UFE4 941 aa24.55■■□□□ 1.52
ACTN1-220ENST00000556433 CPSF3Q9UKF6 684 aaKnown RBP24.55■■□□□ 1.52
ACTN1-220ENST00000556433 ANKRD63C9JTQ0 380 aa24.54■■□□□ 1.52
ACTN1-220ENST00000556433 AARSP49588 968 aaKnown RBP eCLIP24.54■■□□□ 1.52
ACTN1-220ENST00000556433 PRKCQQ04759 706 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms