RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ARID2Q68CP9 1835 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 VWA3AA6NCI4 1184 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 THP07101 528 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 LONP1P36776 959 aaKnown RBP17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 GAS6Q14393 721 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 NAB2Q15742 525 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 FAM78AQ5JUQ0 283 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 DNASE1L2Q92874 299 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 GDE1Q9NZC3 331 aa17.43■□□□□ 0.38
SDR39U1-217ENST00000556249 MAN2B1O00754 1011 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 RECQL4O94761 1208 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 POU2F2P09086 479 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 FGFR3P22607 806 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 TXKP42681 527 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 FXR2P51116 673 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 CCR3P51677 355 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 POU5F1BQ06416 359 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 SPIRE1Q08AE8 756 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 CSRP2Q16527 193 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 N4BP2L1Q5TBK1 243 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 HEATR6Q6AI08 1181 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 AK8Q96MA6 479 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 ZSWIM3Q96MP5 696 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 CORO1BQ9BR76 489 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 TRMT61BQ9BVS5 477 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 POLR3FQ9H1D9 316 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 TTC12Q9H892 705 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 ZFP14Q9HCL3 533 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 ZNF334Q9HCZ1 680 aaPredicted RBP17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 MTRRQ9UBK8 725 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 PCDHA12Q9UN75 941 aa17.42■□□□□ 0.38
SDR39U1-217ENST00000556249 LRRIQ4A6NIV6 560 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 GADD45BO75293 160 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PTPN2P17706 415 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 CMA1P23946 247 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 TKTP29401 623 aaKnown RBP17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 GDI1P31150 447 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 CCR2P41597 374 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 CXCL12P48061 93 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 ELAVL2Q12926 359 aaKnown RBP17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PDIA5Q14554 519 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 CCDC6Q16204 474 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 GLRA4Q5JXX5 417 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PRSS36Q5K4E3 855 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PIGOQ8TEQ8 1089 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 RBM12Q9NTZ6 932 aaKnown RBP17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 ANGPTL2Q9UKU9 493 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 GDAQ9Y2T3 454 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 PIAS3Q9Y6X2 628 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 F5P12259 2224 aa17.41■□□□□ 0.38
SDR39U1-217ENST00000556249 LRP3O75074 770 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 DGAT1O75907 488 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 B3GAT3O94766 335 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 MBD3O95983 291 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 LRG1P02750 347 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 CHRNB1P11230 501 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 LIG1P18858 919 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 CCNE1P24864 410 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 VIPR2P41587 438 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 BRCC3P46736 316 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 CLCNKBP51801 687 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 ARPP19P56211 112 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 GRIN1Q05586 938 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 IL17AQ16552 155 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 CD300LGQ6UXG3 332 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 VITQ6UXI7 678 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 MAMSTRQ6ZN01 415 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 DDX27Q96GQ7 796 aaKnown RBP17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 EIF2AK1Q9BQI3 630 aaKnown RBP17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 NFKBIZQ9BYH8 718 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 PDZD7Q9H5P4 517 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 C2orf42Q9NWW7 574 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 STK24Q9Y6E0 443 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 RALGAPA1Q6GYQ0 2036 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 CHD6Q8TD26 2715 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
SDR39U1-217ENST00000556249 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 GJA1P17302 382 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 TXLNAP40222 546 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 ROR1Q01973 937 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 COL9A2Q14055 689 aaPredicted RBP17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 SKOR2Q2VWA4 1001 aaPredicted RBP17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 RESP18Q5W5W9 173 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 SHC4Q6S5L8 630 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 MAP4K3Q8IVH8 894 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 HS6ST3Q8IZP7 471 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 C3orf58Q8NDZ4 430 aa17.39■□□□□ 0.37
SDR39U1-217ENST00000556249 IRF7Q92985 503 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms