RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 C1orf228Q6PIY5 440 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 LRRN4Q8WUT4 740 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 GTF3C4Q9UKN8 822 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 CDH8P55286 799 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 LRRC8CQ8TDW0 803 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 BSNDQ8WZ55 320 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 CFAP36Q96G28 342 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 PITPNM3Q9BZ71 974 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 ALDH3A1P30838 453 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 HSPA9P38646 679 aaKnown RBP15.74■□□□□ 0.11
CUX1-215ENST00000556210 SCTRP47872 440 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 PTENP60484 403 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 PRELID2Q8N945 189 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 TELO2Q9Y4R8 837 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 MYH3P11055 1940 aa15.74■□□□□ 0.11
CUX1-215ENST00000556210 PFASO15067 1338 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 UBE4BO95155 1302 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 GTPBP10A4D1E9 387 aaKnown RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 H0Y3Z8 333 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 MYL6P60660 151 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 BYSLQ13895 437 aaKnown RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 FAXCQ5TGI0 409 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 SLFN12LQ6IEE8 588 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 SLC17A8Q8NDX2 589 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 TOGARAM1Q9Y4F4 1720 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 TCF7P36402 384 aaPredicted RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 AMHR2Q16671 573 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 ZBTB41Q5SVQ8 909 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 DPP9Q86TI2 863 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 SNF8Q96H20 258 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 CDC42EP4Q9H3Q1 356 aaKnown RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 TXNDC16Q9P2K2 825 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 IRS2Q9Y4H2 1338 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 ITGB4P16144 1822 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 M0QYV0 167 aa15.73■□□□□ 0.11
CUX1-215ENST00000556210 DIS3Q9Y2L1 958 aaKnown RBP15.73■□□□□ 0.11
CUX1-215ENST00000556210 PIK3CDO00329 1044 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 PRKCBP05771 671 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 DUOXA2Q1HG44 320 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 GJC2Q5T442 439 aaPredicted RBP15.72■□□□□ 0.11
CUX1-215ENST00000556210 FAM102AQ5T9C2 384 aaPredicted RBP15.72■□□□□ 0.11
CUX1-215ENST00000556210 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 EPM2AIP1Q7L775 607 aaPredicted RBP15.72■□□□□ 0.11
CUX1-215ENST00000556210 C4orf19Q8IY42 314 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TMEM161BQ8NDZ6 487 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 AGBL3Q8NEM8 1001 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 ATL2Q8NHH9 583 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 SCFD2Q8WU76 684 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.72■□□□□ 0.115e-7■■■■■ 64.8
CUX1-215ENST00000556210 TGS1Q96RS0 853 aaKnown RBP15.72■□□□□ 0.11
CUX1-215ENST00000556210 LCA5LO95447 670 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TXNP10599 105 aaKnown RBP15.72■□□□□ 0.11
CUX1-215ENST00000556210 ETS1P14921 441 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 MOB2Q70IA6 237 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 NME8Q8N427 588 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 LRRC57Q8N9N7 239 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TTC17Q96AE7 1141 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TRIM11Q96F44 468 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TMEM121Q9BTD3 319 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 SLC38A10Q9HBR0 1119 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 FAM49BQ9NUQ9 324 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 UVRAGQ9P2Y5 699 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 RBAK-RBAKDNI3L0D1 243 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 CLGNO14967 610 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 AGBL2Q5U5Z8 902 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 A0A0G2JND7 137 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 TJP3O95049 919 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 GPC3P51654 580 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 KCNV1Q6PIU1 500 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 RFX8Q6ZV50 586 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 CCNYQ8ND76 341 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 OR6B3Q8NGW1 331 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 RILPQ96NA2 401 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 ADPGKQ9BRR6 497 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
CUX1-215ENST00000556210 EP400Q96L91 3159 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 CCT8L1PA6NM43 557 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 KRT3P12035 628 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 RFX1P22670 979 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 MARSP56192 900 aaKnown RBP15.71■□□□□ 0.11
CUX1-215ENST00000556210 IL9RQ01113 521 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 FMO1Q01740 532 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 CUL2Q13617 745 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 ZRSR2Q15696 482 aaKnown RBP15.71■□□□□ 0.11
CUX1-215ENST00000556210 OR5B17Q8NGF7 314 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 KCNV2Q8TDN2 545 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 RNF34Q969K3 372 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 PLSCR1O15162 318 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 GCLCP48506 637 aaPredicted RBP15.71■□□□□ 0.11
CUX1-215ENST00000556210 FUKQ8N0W3 1084 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 HES6Q96HZ4 224 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 HESX1Q9UBX0 185 aa15.71■□□□□ 0.11
CUX1-215ENST00000556210 ZNF862O60290 1169 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 YY1P25490 414 aa15.71■□□□□ 0.1
CUX1-215ENST00000556210 NUMBP49757 651 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms