RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HSPBP1Q9NZL4 362 aa16.47■□□□□ 0.23
ACTN1-217ENST00000556203 PPEF2O14830 753 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SYN3O14994 580 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 CLIC2O15247 247 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 ADAM12O43184 909 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 TGM5O43548 720 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SPATA31D3P0C874 917 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SNRPFP62306 86 aaKnown RBP16.46■□□□□ 0.23
ACTN1-217ENST00000556203 ITIH3Q06033 890 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
ACTN1-217ENST00000556203 VARS2Q5ST30 1063 aaKnown RBP16.46■□□□□ 0.23
ACTN1-217ENST00000556203 C9orf57Q5W0N0 161 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SPATA31D4Q6ZUB0 917 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 ANKS3Q6ZW76 656 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 HS2ST1Q7LGA3 356 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 ADHFE1Q8IWW8 467 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 CCDC47Q96A33 483 aaKnown RBP16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SUSD3Q96L08 255 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 SFXN1Q9H9B4 322 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 MTRRQ9UBK8 725 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 TCHHQ07283 1943 aa16.46■□□□□ 0.23
ACTN1-217ENST00000556203 CITO14578 2027 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 ZNF233A6NK53 670 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 TNFRSF10AO00220 468 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 WEE2P0C1S8 567 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 SSTR3P32745 418 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-217ENST00000556203 CYP2J2P51589 502 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 TFAMQ00059 246 aaKnown RBP16.45■□□□□ 0.22
ACTN1-217ENST00000556203 ZP2Q05996 745 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 CBX2Q14781 532 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-217ENST00000556203 ELMSAN1Q6PJG2 1045 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 TMC5Q6UXY8 1006 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 CBWD2Q8IUF1 395 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 FEZF2Q8TBJ5 459 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 PDE11AQ9HCR9 933 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 DPP3Q9NY33 737 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 DPP7Q9UHL4 492 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 BACE2Q9Y5Z0 518 aa16.45■□□□□ 0.22
ACTN1-217ENST00000556203 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
ACTN1-217ENST00000556203 PIRO00625 290 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 RHOBTB3O94955 611 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 C1RP00736 705 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
ACTN1-217ENST00000556203 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 RSPO2Q6UXX9 243 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-217ENST00000556203 DSTYKQ6XUX3 929 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 GJD3Q8N144 294 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 APPL2Q8NEU8 664 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 KIAA1586Q9HCI6 787 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 CD320Q9NPF0 282 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
ACTN1-217ENST00000556203 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
ACTN1-217ENST00000556203 ANO9A1A5B4 782 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 M0QZQ0 153 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 OR1D2P34982 312 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 LILRA4P59901 499 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 PNOCQ13519 176 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 RAB33AQ14088 237 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 MRPL58Q14197 206 aaKnown RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 KCNB1Q14721 858 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 SNRNP35Q16560 246 aaKnown RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 ATAT1Q5SQI0 421 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 KREMEN2Q8NCW0 462 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 GOLGA5Q8TBA6 731 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 RIPOR3Q96MK2 946 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 PLEKHA4Q9H4M7 779 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
ACTN1-217ENST00000556203 TIMM13Q9Y5L4 95 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-217ENST00000556203 A0A0C4DFX4 3053 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 H7C4K7 107 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 SPTLC1O15269 473 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-217ENST00000556203 RFPL2O75678 378 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 MTHFRP42898 656 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-217ENST00000556203 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 GPR149Q86SP6 731 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 CMASQ8NFW8 434 aaPredicted RBP16.42■□□□□ 0.22
ACTN1-217ENST00000556203 HDAC7Q8WUI4 952 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 MTMR12Q9C0I1 747 aa16.42■□□□□ 0.22
ACTN1-217ENST00000556203 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms