RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 DOCK6Q96HP0 2047 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 MYO15AQ9UKN7 3530 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 TTC26A0AVF1 554 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 VPS37CA5D8V6 355 aaPredicted RBP23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 TRAK2O60296 914 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 RHOP08100 348 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 PTPN2P17706 415 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 LRPAP1P30533 357 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 PFKPQ01813 784 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 KARSQ15046 597 aaKnown RBP23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 DDX12PQ92771 950 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 KIF12Q96FN5 646 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 OXCT2Q9BYC2 517 aaPredicted RBP23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 BLOC1S4Q9NUP1 217 aa23.51■■□□□ 1.35
SDR39U1-216ENST00000556175 CUL4AQ13619 759 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 MCM6Q14566 821 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 ANGPT1Q15389 498 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 CD302Q8IX05 232 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 ELMOD1Q8N336 334 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 LARP4BQ92615 738 aaKnown RBP23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 HAPLN2Q9GZV7 340 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 INSL5Q9Y5Q6 135 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 MYH15Q9Y2K3 1946 aa23.5■■□□□ 1.35
SDR39U1-216ENST00000556175 OGTO15294 1046 aa23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 GPC5P78333 572 aa23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 ST13P5Q8NFI4 369 aaPredicted RBP23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 RPP25Q9BUL9 199 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 CCSER1Q9C0I3 900 aa23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 ZHX3Q9H4I2 956 aa23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 RPF1Q9H9Y2 349 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 AFF4Q9UHB7 1163 aaKnown RBP23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 SIT1Q9Y3P8 196 aa23.49■■□□□ 1.35
SDR39U1-216ENST00000556175 M0QZQ0 153 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 ZNF197O14709 1029 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 ECI2O75521 394 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 CPB1P15086 417 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 TNFSF9P41273 254 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 STARD6P59095 220 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 YWHAHQ04917 246 aaPredicted RBP23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 GRIN1Q05586 938 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 SPAG1Q07617 926 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 ZBTB6Q15916 424 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 IQCEQ6IPM2 695 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 LRRC15Q8TF66 581 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 ING5Q8WYH8 240 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 KXD1Q9BQD3 176 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 MSTO1Q9BUK6 570 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 DMDP11532 3685 aa23.48■■□□□ 1.35
SDR39U1-216ENST00000556175 NOTCH4Q99466 2003 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 A0A0B4J269 797 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 LACTBL1A8MY62 500 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 MICAL2O94851 1124 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 PAX3P23760 479 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 DDIT3P35638 169 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 GTF2BQ00403 316 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 PRKCQQ04759 706 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 ENOX2Q16206 610 aaKnown RBP23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 SLC5A9Q2M3M2 681 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 CYP4A22Q5TCH4 519 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 PDZD4Q76G19 769 aaPredicted RBP23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 FRMD5Q7Z6J6 570 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 USP37Q86T82 979 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 MAP4K3Q8IVH8 894 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 KRI1Q8N9T8 703 aaKnown RBP23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 LEMD2Q8NC56 503 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 NKD2Q969F2 451 aaPredicted RBP23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 CORO1BQ9BR76 489 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 CCDC39Q9UFE4 941 aa23.47■■□□□ 1.35
SDR39U1-216ENST00000556175 PRR23AA6NEV1 266 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 FAM189A1O60320 539 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 OAZ2O95190 189 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 SEC24AO95486 1093 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 ADRB2P07550 413 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 TXLNAP40222 546 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 AARSP49588 968 aaKnown RBP eCLIP23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 ADCY1Q08828 1119 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 BEST2Q8NFU1 509 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 PJA1Q8NG27 643 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 MCRS1Q96EZ8 462 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 ZNF512Q96ME7 567 aaPredicted RBP23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 ST6GALNAC4Q9H4F1 302 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 STK17AQ9UEE5 414 aa23.46■■□□□ 1.35
SDR39U1-216ENST00000556175 CEBPBP17676 345 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 PLD1Q13393 1074 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 MLF2Q15773 248 aaPredicted RBP23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 PRSS36Q5K4E3 855 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 SPECC1Q5M775 1068 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 SLFN12LQ6IEE8 588 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 DSTYKQ6XUX3 929 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 CPSF3Q9UKF6 684 aaKnown RBP23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 DERAQ9Y315 318 aa23.45■■□□□ 1.34
SDR39U1-216ENST00000556175 OR6C75A6NL08 312 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 SNW1Q13573 536 aaKnown RBP23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 SLC44A4Q53GD3 710 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 ZBTB41Q5SVQ8 909 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 SPATA1Q5VX52 437 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 ASCL5Q7RTU5 278 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 ELSPBP1Q96BH3 223 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 HVCN1Q96D96 273 aa23.44■■□□□ 1.34
SDR39U1-216ENST00000556175 FAM212AQ96EL1 285 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms