RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PIN4Q9Y237 131 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 FBXO21O94952 628 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NDUFB10O96000 172 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 RARBP10826 455 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PDGFRAP16234 1089 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 KCNA2P16389 499 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 FNTAP49354 379 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 KRT17Q04695 432 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PRKCQQ04759 706 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NSUN2Q08J23 767 aaKnown RBP eCLIP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 WDR72Q3MJ13 1102 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 FAM133BQ5BKY9 247 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 RNF180Q86T96 592 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ATP6V0D2Q8N8Y2 350 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 COG4Q9H9E3 785 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NDFIP2Q9NV92 336 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 TPX2Q9ULW0 747 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 FAM32AQ9Y421 112 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ARHGEF9O43307 516 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 POLBP06746 335 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 DNAJB2P25686 324 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 EMC2Q15006 297 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 NOP9Q86U38 636 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 BBS7Q8IWZ6 715 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 ZBED8Q8IZ13 594 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PDLIM2Q96JY6 352 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 TGS1Q96RS0 853 aaKnown RBP11.26□□□□□ -0.61
ACTN1-216ENST00000556083 RBBP8Q99708 897 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 EHD4Q9H223 541 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 PKD2L2Q9NZM6 624 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 GRID1Q9ULK0 1009 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 AGAP1Q9UPQ3 857 aa11.26□□□□□ -0.61
ACTN1-216ENST00000556083 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 NDUFS3O75489 264 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SUPT20HL2P0C7V6 817 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ARSEP51690 589 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 NCKAP1LP55160 1127 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 GEMIN4P57678 1058 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 PREPLQ4J6C6 727 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF394Q53GI3 561 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RASGRP2Q7LDG7 609 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 TAS2R42Q7RTR8 314 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SPATA4Q8NEY3 305 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 CARD9Q9H257 536 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 CNOT7Q9UIV1 285 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 MTO1Q9Y2Z2 717 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 FIS1Q9Y3D6 152 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 MAN1A2O60476 641 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RPS6KA5O75582 802 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 MAPTP10636 758 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RANBP1P43487 201 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 HSPA13P48723 471 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 GTF2A2P52657 109 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ITGA9Q13797 1035 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SNRNP35Q16560 246 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SYTL3Q4VX76 610 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 FIGNQ5HY92 759 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ERGIC2Q96RQ1 377 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ZNF70Q9UC06 446 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 CHD1O14646 1710 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RASSF10A6NK89 507 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 TRPA1O75762 1119 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 CNTFP26441 200 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 HADHAP40939 763 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 SULT1E1P49888 294 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 MAGOHP61326 146 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 GFPT1Q06210 699 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 HIC1Q14526 733 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 HIST2H2ACQ16777 129 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ZC3H12BQ5HYM0 836 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 THEMIS2Q5TEJ8 643 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 HIST2H2AA3Q6FI13 130 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 TIGD7Q6NT04 549 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 STN1Q9H668 368 aaKnown RBP11.25□□□□□ -0.61
ACTN1-216ENST00000556083 RUBCNLQ9H714 662 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 BATF3Q9NR55 127 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 MOSPD1Q9UJG1 213 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 ADAM21Q9UKJ8 722 aa11.25□□□□□ -0.61
ACTN1-216ENST00000556083 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 C5orf58C9J3I9 102 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 GPR182O15218 404 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 TDP2O95551 362 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 CYP11B2P19099 503 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 GRIK1P39086 918 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 HARS2P49590 506 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 TAF6P49848 677 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 POU5F1BQ06416 359 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 GLYCTKQ8IVS8 523 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
ACTN1-216ENST00000556083 PDCD6IPQ8WUM4 868 aaKnown RBP11.24□□□□□ -0.61
ACTN1-216ENST00000556083 CYP3A43Q9HB55 503 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms