RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 TMEM200BQ69YZ2 307 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 NOL8Q76FK4 1167 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 GSPT2Q8IYD1 628 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 ZNF276Q8N554 614 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 BRI3BPQ8WY22 251 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 DEPDC7Q96QD5 511 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 MLST8Q9BVC4 326 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 BTBD2Q9BX70 525 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 INCENPQ9NQS7 918 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 Q9UFV3 132 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 CDC42EP3Q9UKI2 254 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 HS3ST4Q9Y661 456 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 FAM205AQ6ZU69 1335 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 FLT4P35916 1363 aa3.85□□□□□ -1.79
EFCAB11-210ENST00000556078 COL4A3Q01955 1670 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 RIF1Q5UIP0 2472 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 SMAD7O15105 426 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 B3GALT2O43825 422 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 SUSD5O60279 629 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 ZBTB48P10074 688 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 PSMC4P43686 418 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 ID4P47928 161 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 TAP1Q03518 808 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 TCIRG1Q13488 830 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 RAB33AQ14088 237 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 HLFQ16534 295 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 TNNI3KQ59H18 835 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 LARP1BQ659C4 914 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 HTR3DQ70Z44 454 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 OTOP2Q7RTS6 562 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 ASCL5Q7RTU5 278 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 PROKR1Q8TCW9 393 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 SH3RF2Q8TEC5 729 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 COG3Q96JB2 828 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 KCNJ15Q99712 375 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 ZFYVE21Q9BQ24 234 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 MYPNQ86TC9 1320 aa3.84□□□□□ -1.79
EFCAB11-210ENST00000556078 FAM208BQ5VWN6 2430 aa3.84□□□□□ -1.8
EFCAB11-210ENST00000556078 COL4A4P53420 1690 aaPredicted RBP3.84□□□□□ -1.8
EFCAB11-210ENST00000556078 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 A0A1W2PRX2 142 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM90A27PA6NNH2 459 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 IKBKBO14920 756 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 KIAA0355O15063 1070 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 MARCH6O60337 910 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 CDC45O75419 566 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ABHD16AO95870 558 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 PTPN1P18031 435 aaKnown RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 IL6STP40189 918 aaPredicted RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 CLK3P49761 638 aaKnown RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ZNF280AP59817 542 aaPredicted RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 AKNAD1Q5T1N1 836 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 HECTD2Q5U5R9 776 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 BTBD8Q5XKL5 378 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 KANK2Q63ZY3 851 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ZNF530Q6P9A1 599 aaPredicted RBP3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM178BQ8IXR5 827 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 NLGN4XQ8N0W4 816 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 RAET1EQ8TD07 263 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 LPPQ93052 612 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 MKL1Q969V6 931 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 GPR87Q9BY21 358 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 CD244Q9BZW8 370 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 C11orf49Q9H6J7 331 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 SNTG2Q9NY99 539 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ACTR10Q9NZ32 417 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 PRKAG3Q9UGI9 489 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 CPA4Q9UI42 421 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ATP6V0A2Q9Y487 856 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 ZFYVE26Q68DK2 2539 aa3.83□□□□□ -1.8
EFCAB11-210ENST00000556078 PTPRFP10586 1907 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ATRNL1Q5VV63 1379 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ABCC4O15439 1325 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 AOX1Q06278 1338 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ADGRA2Q96PE1 1338 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ST20-MTHFSA0A0A6YYL1 179 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 GRXCR1A8MXD5 290 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM47E-STBD1D6RA91 191 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ECE2O60344 883 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 DLX3O60479 287 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 TLR2O60603 784 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 DNAJC6O75061 913 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 FAM20BO75063 409 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 RAB11FIP3O75154 756 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 DDAH1O94760 285 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 VIL1P09327 827 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 GRIA2P42262 883 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 MTHFSP49914 203 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 RABGGTBP53611 331 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 CD83Q01151 205 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 ST3GAL2Q16842 350 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 KRT40Q6A162 431 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 C17orf99Q6UX52 265 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 C6orf15Q6UXA7 325 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 LRRC55Q6ZSA7 311 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 RD3Q7Z3Z2 195 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 DCAF4Q8WV16 495 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 APPBP2Q92624 585 aa3.82□□□□□ -1.8
EFCAB11-210ENST00000556078 RMDN1Q96DB5 314 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms