RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ECHS1P30084 290 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 RPS7P62081 194 aaKnown RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 PABPC4Q13310 644 aaKnown RBP eCLIP4.51□□□□□ -1.69
SRP54-207ENST00000555535 TRIM25Q14258 630 aaKnown RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 ZNF529Q6P280 563 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 ZNF66Q6ZN08 573 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 MEPCEQ7L2J0 689 aaKnown RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 CLNKQ7Z7G1 428 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 NXPE1Q8N323 547 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 FITM2Q8N6M3 262 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 UHRF1Q96T88 793 aaPredicted RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 HSFX1Q9UBD0 423 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 ST3GAL5Q9UNP4 418 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 ZNF891A8MT65 544 aaPredicted RBP4.5□□□□□ -1.69
SRP54-207ENST00000555535 AKR1B10O60218 316 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 RFPL3O75679 317 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 PRSS23O95084 383 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 ASMTLO95671 621 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 NXPH1P58417 271 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 DSG1Q02413 1049 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 ITIH3Q06033 890 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 Q8NA96 180 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 GPR156Q8NFN8 814 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 CHTF18Q8WVB6 975 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 CASKIN2Q8WXE0 1202 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 PRSS22Q9GZN4 317 aa4.5□□□□□ -1.69
SRP54-207ENST00000555535 FPGSQ05932 587 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 HYAL1Q12794 435 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 TRIP6Q15654 476 aaKnown RBP4.49□□□□□ -1.69
SRP54-207ENST00000555535 C21orf62-AS1Q17RA5 79 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 SUPT20HL1Q3ZLR7 823 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 SEM1Q6ZVN7 128 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 LANCL2Q9NS86 450 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 KLC4Q9NSK0 619 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 FBXO34Q9NWN3 711 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 THG1LQ9NWX6 298 aaKnown RBP4.49□□□□□ -1.69
SRP54-207ENST00000555535 TMEM260Q9NX78 707 aa4.49□□□□□ -1.69
SRP54-207ENST00000555535 FAM90A10PA6NDY2 464 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 SOCS2O14508 198 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 KPNA6O60684 536 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 RAB11FIP3O75154 756 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 HNRNPCP07910 306 aaKnown RBP eCLIP4.48□□□□□ -1.69
SRP54-207ENST00000555535 CHRM2P08172 466 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 ADSLP30566 484 aaPredicted RBP4.48□□□□□ -1.69
SRP54-207ENST00000555535 LGALS4P56470 323 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 PER3P56645 1201 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 TERF2Q15554 542 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 TWIST1Q15672 202 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 CEP85Q6P2H3 762 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 SLC30A5Q8TAD4 765 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 LPIN2Q92539 896 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 TMEM125Q96AQ2 219 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 QTRT1Q9BXR0 403 aaKnown RBP4.48□□□□□ -1.69
SRP54-207ENST00000555535 SENP6Q9GZR1 1112 aaPredicted RBP4.48□□□□□ -1.69
SRP54-207ENST00000555535 SPRTNQ9H040 489 aaPredicted RBP4.48□□□□□ -1.69
SRP54-207ENST00000555535 KCTD10Q9H3F6 313 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 MAGEC2Q9UBF1 373 aaPredicted RBP4.48□□□□□ -1.69
SRP54-207ENST00000555535 SERGEFQ9UGK8 458 aa4.48□□□□□ -1.69
SRP54-207ENST00000555535 WDR27A2RRH5 827 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 KDM1AO60341 852 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 JTBO76095 146 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 CYP2D6P10635 497 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 DRD4P21917 467 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 CCT8P50990 548 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 NOMO3P69849 1222 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 NOMO1Q15155 1222 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 SF3A1Q15459 793 aaKnown RBP4.47□□□□□ -1.69
SRP54-207ENST00000555535 NFE2L2Q16236 605 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 PROSER3Q2NL68 480 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 PLAC9Q5JTB6 97 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.47□□□□□ -1.69
SRP54-207ENST00000555535 MRPL10Q7Z7H8 261 aaKnown RBP4.47□□□□□ -1.69
SRP54-207ENST00000555535 KRT78Q8N1N4 520 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 FBXO18Q8NFZ0 1043 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 MYCBPAPQ8TBZ2 947 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 RIN2Q8WYP3 895 aaPredicted RBP4.47□□□□□ -1.69
SRP54-207ENST00000555535 PBKQ96KB5 322 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 TMEM140Q9NV12 185 aa4.47□□□□□ -1.69
SRP54-207ENST00000555535 CYP2D7A0A087X1C5 515 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 OAZ2O95190 189 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 KCNA2P16389 499 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 POU3F2P20265 443 aaPredicted RBP4.46□□□□□ -1.7
SRP54-207ENST00000555535 GATA3P23771 443 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 GUCY1A2P33402 732 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 ALDH1A3P47895 512 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 NEK4P51957 841 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 SART3Q15020 963 aaKnown RBP4.46□□□□□ -1.7
SRP54-207ENST00000555535 RABEP1Q15276 862 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 PCBP1Q15365 356 aaKnown RBP eCLIP4.46□□□□□ -1.7
SRP54-207ENST00000555535 CEP78Q5JTW2 689 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 SLC2A7Q6PXP3 512 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 TSHZ1Q6ZSZ6 1077 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 PQLC1Q8N2U9 271 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 B3GALNT2Q8NCR0 500 aa4.46□□□□□ -1.7
SRP54-207ENST00000555535 PIGOQ8TEQ8 1089 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms