RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 GORABQ5T7V8 394 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 THEMIS2Q5TEJ8 643 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 Q6YL49 198 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 DAAM2Q86T65 1068 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 TTC7BQ86TV6 843 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 UNC5BQ8IZJ1 945 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 CMTM4Q8IZR5 234 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 UHRF1Q96T88 793 aaPredicted RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 ZNF700Q9H0M5 742 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 PRDM13Q9H4Q3 707 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 ZNF768Q9H5H4 540 aaKnown RBP6.72□□□□□ -1.33
VRK1-205ENST00000555402 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
VRK1-205ENST00000555402 TDP1Q9NUW8 608 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 NCDNQ9UBB6 729 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 RIPOR2Q9Y4F9 1068 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 COMMD10Q9Y6G5 202 aa6.72□□□□□ -1.33
VRK1-205ENST00000555402 ANO9A1A5B4 782 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 TRIM24O15164 1050 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 ENDOD1O94919 500 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 ZBED1O96006 694 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 GNAT2P19087 354 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 HK1P19367 917 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 ZEB1P37275 1124 aaPredicted RBP6.71□□□□□ -1.34
VRK1-205ENST00000555402 SEPT2Q15019 361 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 EPHA10Q5JZY3 1008 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 RSPH3Q86UC2 560 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 PIK3C3Q8NEB9 887 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.71□□□□□ -1.34
VRK1-205ENST00000555402 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 SNX33Q8WV41 574 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 RGMAQ96B86 450 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 B3GNT5Q9BYG0 378 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.34
VRK1-205ENST00000555402 PLEKHD1A6NEE1 506 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 PMM2O15305 246 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 NPEPPSP55786 919 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 FBXO42Q6P3S6 717 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 DARS2Q6PI48 645 aaKnown RBP6.7□□□□□ -1.34
VRK1-205ENST00000555402 NPNTQ6UXI9 565 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 TAS1R1Q7RTX1 841 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 APBB1IPQ7Z5R6 666 aaPredicted RBP6.7□□□□□ -1.34
VRK1-205ENST00000555402 FAM43AQ8N2R8 423 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 SUPT20HQ8NEM7 779 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 CCHCR1Q8TD31 782 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 MYEOVQ96EZ4 313 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 MANSC1Q9H8J5 431 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.7□□□□□ -1.34
VRK1-205ENST00000555402 STXBP5LQ9Y2K9 1186 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 PCDHB1Q9Y5F3 818 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 NR2E3Q9Y5X4 410 aa6.7□□□□□ -1.34
VRK1-205ENST00000555402 COL11A2P13942 1736 aaPredicted RBP6.7□□□□□ -1.34
VRK1-205ENST00000555402 LPXNO60711 386 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 STC2O76061 302 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 ALDH1A2O94788 518 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 MYL3P08590 195 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 MAP2K6P52564 334 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 PTTG1IPP53801 180 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 FAM193AP78312 1265 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 DSC2Q02487 901 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 ANO6Q4KMQ2 910 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 CYB5RLQ6IPT4 315 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 EXOC8Q8IYI6 725 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 KLHDC4Q8TBB5 520 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 CDK5RAP3Q96JB5 506 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 CLPTM1LQ96KA5 538 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 SERHL2Q9H4I8 314 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 C14orf93Q9H972 538 aaKnown RBP6.69□□□□□ -1.34
VRK1-205ENST00000555402 PCDHGB6Q9Y5F9 930 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 SPATA31A6Q5VVP1 1343 aa6.69□□□□□ -1.34
VRK1-205ENST00000555402 CAPN8A6NHC0 703 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 AHRRA9YTQ3 701 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 SLC16A6O15403 523 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 SGTAO43765 313 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 PQBP1O60828 265 aaKnown RBP6.68□□□□□ -1.34
VRK1-205ENST00000555402 HRGP04196 525 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 GYPEP15421 78 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 KIR2DL3P43628 341 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 CACNB3P54284 484 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 CDC42EP1Q00587 391 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 MST1LQ2TV78 715 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 C19orf54Q5BKX5 351 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 RNF220Q5VTB9 566 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 Q6ZVL8 140 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 C11orf96Q7Z7L8 435 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 MSL3Q8N5Y2 521 aaKnown RBP6.68□□□□□ -1.34
VRK1-205ENST00000555402 C3orf20Q8ND61 904 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 PARD3BQ8TEW8 1205 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 ZNF480Q8WV37 535 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 TNIP3Q96KP6 325 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 LRFN3Q9BTN0 628 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 WDR11Q9BZH6 1224 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 ING3Q9NXR8 418 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms