RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	NECTIN4	Q96NY8	510 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	ADAM2	Q99965	735 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	CDT1	Q9H211	546 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	NGRN	Q9NPE2	291 aa	Known RBP	10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	AAAS	Q9NRG9	546 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	TMEM161A	Q9NX61	479 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	DLL3	Q9NYJ7	618 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	AGO2	Q9UKV8	859 aa	Known RBP	10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	UST	Q9Y2C2	406 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	PCDHB2	Q9Y5E7	798 aa		10.45	□□□□□ -0.74
PRKCH-215	ENST00000555382	CARNS1	A5YM72	827 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	C2orf71	A6NGG8	1288 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ANKRD63	C9JTQ0	380 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	SLC16A3	O15427	465 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	HOXA2	O43364	376 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	SRGAP2B	P0DMP2	458 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	LAG3	P18627	525 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	PBX3	P40426	434 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	CLDN10	P78369	228 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ANGPT1	Q15389	498 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	SURF1	Q15526	300 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZNF568	Q3ZCX4	644 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	EEF1DP3	Q658K8	133 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	KIAA1841	Q6NSI8	718 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ALKAL1	Q6UXT8	129 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZBTB33	Q86T24	672 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ECHDC2	Q86YB7	292 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	NT5DC4	Q86YG4	428 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	NELFCD	Q8IXH7	590 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	THNSL1	Q8IYQ7	743 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	GPD1L	Q8N335	351 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	MRPL43	Q8N983	215 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	MICAL1	Q8TDZ2	1067 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	CASP10	Q92851	521 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	PGBD4	Q96DM1	585 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	CASD1	Q96PB1	797 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	MED15	Q96RN5	788 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	DUSP9	Q99956	384 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	TCHP	Q9BT92	498 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	MSTO1	Q9BUK6	570 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	HAPLN2	Q9GZV7	340 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	THAP9	Q9H5L6	903 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	ASB7	Q9H672	318 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	CPSF3	Q9UKF6	684 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	MAPK8IP1	Q9UQF2	711 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	GIT1	Q9Y2X7	761 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	DERA	Q9Y315	318 aa		10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	TDRD15	B5MCY1	1934 aa	Known RBP	10.44	□□□□□ -0.74
PRKCH-215	ENST00000555382	DOCK8	Q8NF50	2099 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZNF233	A6NK53	670 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	SMTNL1	A8MU46	457 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CETN3	O15182	167 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CLASP2	O75122	1294 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	IL18RAP	O95256	599 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	KCNE1	P15382	129 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	FGFR4	P22455	802 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	NR2F2	P24468	414 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZNF165	P49910	485 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	PMS1	P54277	932 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	MYL5	Q02045	173 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ADAM9	Q13443	819 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ISM2	Q6H9L7	571 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	KCNT2	Q6UVM3	1135 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	USP37	Q86T82	979 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	SLC39A11	Q8N1S5	342 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CSGALNACT2	Q8N6G5	542 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	DTWD2	Q8NBA8	298 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	SMG8	Q8ND04	991 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	TMC2	Q8TDI7	906 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	BORCS6	Q96GS4	357 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CPB2	Q96IY4	423 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ZBTB45	Q96K62	511 aa	Predicted RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	ACAP3	Q96P50	834 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CBWD1	Q9BRT8	395 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CCDC94	Q9BW85	323 aa	Predicted RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	TRIM6	Q9C030	488 aa	Predicted RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	METTL14	Q9HCE5	456 aa	Known RBP	10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	HSPBP1	Q9NZL4	362 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	KANSL3	Q9P2N6	904 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	FRMD4B	Q9Y2L6	1034 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	IPP	Q9Y573	584 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	PCDHB7	Q9Y5E2	793 aa		10.43	□□□□□ -0.74
PRKCH-215	ENST00000555382	CACNA1I	Q9P0X4	2223 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	CACNA1G	O43497	2377 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	TTC26	A0AVF1	554 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	LRRC10B	A6NIK2	292 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	PMM2	O15305	246 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	NPTXR	O95502	500 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	WEE2	P0C1S8	567 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	PSMC2	P35998	433 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	MTHFR	P42898	656 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	AP3M2	P53677	418 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	PPP2R3A	Q06190	1150 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	SNRNP35	Q16560	246 aa	Known RBP	10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	TMEM132A	Q24JP5	1023 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	ANO6	Q4KMQ2	910 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	SMYD5	Q6GMV2	418 aa		10.42	□□□□□ -0.74
PRKCH-215	ENST00000555382	KLHL10	Q6JEL2	608 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms