RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 RASSF10A6NK89 507 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 RTN2O75298 545 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 CETPP11597 493 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 HOXD13P35453 343 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 BEND6Q5SZJ8 279 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 DARS2Q6PI48 645 aaKnown RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 ANKMY2Q8IV38 441 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 TJP1Q07157 1748 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 MOCS2O96007 188 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 ARL1P40616 181 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 SATB1Q01826 763 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 BIRC2Q13490 618 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 SNTG2Q9NY99 539 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 PLCH1Q4KWH8 1693 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 NHSL1Q5SYE7 1610 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 CAPSQ13938 189 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 TMED2Q15363 201 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 MKNK1Q9BUB5 465 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 GANQ9H2C0 597 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 CACNG4Q9UBN1 327 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
ARHGEF40-206ENST00000555232 ARIH2O95376 493 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 SLC25A27O95847 323 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 RALAP11233 206 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 KRT3P12035 628 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 MEA1Q16626 185 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 CXCL17Q6UXB2 119 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 EDEM3Q9BZQ6 932 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 KCND2Q9NZV8 630 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 SOWAHBA6NEL2 793 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 GOLGA8RI6L899 631 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 PRPSAP2O60256 369 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 STAG3L1P0CL83 205 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 BCAR1P56945 870 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 CUL2Q13617 745 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 SUGP1Q8IWZ8 645 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 KIRREL3Q8IZU9 778 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 FAM71BQ8TC56 605 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 SENP7Q9BQF6 1050 aa12.96□□□□□ -0.33
ARHGEF40-206ENST00000555232 HBP1O60381 514 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 TOM1L1O75674 476 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 CST3P01034 146 aaPredicted RBP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZBTB16Q05516 673 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 GPS1Q13098 491 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 TMEM132DQ14C87 1099 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 CREG2Q8IUH2 290 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 USP38Q8NB14 1042 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 HPDLQ96IR7 371 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 INPP4AQ96PE3 977 aaPredicted RBP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 CISHQ9NSE2 258 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 TXNDC16Q9P2K2 825 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 DBR1Q9UK59 544 aaKnown RBP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 PRG3Q9Y2Y8 225 aaPredicted RBP12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 PCDHB2Q9Y5E7 798 aa12.96□□□□□ -0.34
ARHGEF40-206ENST00000555232 E2F8A0AVK6 867 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 FZD9O00144 591 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 MAN1A1P33908 653 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 EFNA5P52803 228 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CDH6P55285 790 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ITKQ08881 620 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ZCWPW2Q504Y3 356 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 IER5Q5VY09 327 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 LBX2Q6XYB7 198 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CABS1Q96KC9 395 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 GCOM2Q9BZD3 368 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 DHX35Q9H5Z1 703 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 KIAA1586Q9HCI6 787 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CD248Q9HCU0 757 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 SAYSD1Q9NPB0 183 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 XPNPEP1Q9NQW7 623 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ADGRA3Q8IWK6 1321 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 KCNA2P16389 499 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ATN1P54259 1190 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 HGSNATQ68CP4 663 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 RUFY4Q6ZNE9 571 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 ABI1Q8IZP0 508 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 PWWP2AQ96N64 755 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 FAM193BQ96PV7 902 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 KLF6Q99612 283 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 PIH1D1Q9NWS0 290 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 NKIRAS1Q9NYS0 192 aa12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-206ENST00000555232 MYH10P35580 1976 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms