RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 BIRC3Q13489 604 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 NCOA4Q13772 614 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 RAB30Q15771 203 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 SCARA3Q6AZY7 606 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 KCNT2Q6UVM3 1135 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 CD300LGQ6UXG3 332 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 LRRC52Q8N7C0 313 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 LMO3Q8TAP4 145 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 TAS1R2Q8TE23 839 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 FAM84AQ96KN4 292 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 PAAF1Q9BRP4 392 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 MMRN2Q9H8L6 949 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 GOLGA2P5Q9HBQ8 144 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
SYNE2-215ENST00000554997 MSRAQ9UJ68 235 aa10.99□□□□□ -0.65
SYNE2-215ENST00000554997 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
SYNE2-215ENST00000554997 A0A1B0GTH6 734 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LCHNA4D1U4 455 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LINC01553A4QN01 128 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 CASTOR2A6NHX0 329 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LGALS16A8MUM7 142 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 ZC3H11AO75152 810 aaKnown RBP eCLIP10.98□□□□□ -0.65
SYNE2-215ENST00000554997 TADA2AO75478 443 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LINC00271P0C7V0 271 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 MYOGP15173 224 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 POLR2BP30876 1174 aaKnown RBP10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LILRA4P59901 499 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 MYL6P60660 151 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 LRIT3Q3SXY7 679 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 FKBP15Q5T1M5 1219 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
SYNE2-215ENST00000554997 GBP6Q6ZN66 633 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 COLGALT1Q8NBJ5 622 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 SEMA4DQ92854 862 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 FAXDC2Q96IV6 333 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 ZNF558Q96NG5 402 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 PBX4Q9BYU1 374 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 XYLT2Q9H1B5 865 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 VRTNQ9H8Y1 702 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
SYNE2-215ENST00000554997 PES1O00541 588 aaKnown RBP10.97□□□□□ -0.65
SYNE2-215ENST00000554997 PPEF2O14830 753 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 TRAPPC3O43617 180 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 ASS1P00966 412 aaKnown RBP10.97□□□□□ -0.65
SYNE2-215ENST00000554997 RB1P06400 928 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 CA3P07451 260 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 FAM163BP0C2L3 166 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 IGFBP6P24592 240 aaPredicted RBP10.97□□□□□ -0.65
SYNE2-215ENST00000554997 PON1P27169 355 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 PBX2P40425 430 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 TAF6P49848 677 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 MYL7Q01449 175 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 UBXN1Q04323 297 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 KCNMA1Q12791 1236 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 EXOC3L4Q17RC7 722 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 WDR44Q5JSH3 913 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 SARM1Q6SZW1 724 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 DPH6Q7L8W6 267 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 SLC39A11Q8N1S5 342 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 TMEM130Q8N3G9 435 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 CCDC150Q8NCX0 1101 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 RABGGTAQ92696 567 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 IGSF21Q96ID5 467 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 SAMD11Q96NU1 681 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 ERGIC2Q96RQ1 377 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 GDAP2Q9NXN4 497 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 CACNG4Q9UBN1 327 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 STK39Q9UEW8 545 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 ADAM28Q9UKQ2 775 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 YBX2Q9Y2T7 364 aaKnown RBP10.97□□□□□ -0.65
SYNE2-215ENST00000554997 MICAL3Q7RTP6 2002 aa10.97□□□□□ -0.65
SYNE2-215ENST00000554997 A0A1W2PQC6 194 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 FSD2A1L4K1 749 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 NT5C1B-RDH14C9J2C7 533 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 M0QZQ0 153 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 SPTLC1O15269 473 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 TEX33O43247 280 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 CBFA2T2O43439 604 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 LRRN2O75325 713 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 KIF4AO95239 1232 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 EFEMP2O95967 443 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 SLC9A1P19634 815 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 PPM1AP35813 382 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 PIK3CAP42336 1068 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 AARSP49588 968 aaKnown RBP eCLIP10.96□□□□□ -0.65
SYNE2-215ENST00000554997 ERVK-21P61565 698 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 PLCB3Q01970 1234 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 TAP1Q03518 808 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 KRT17Q04695 432 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 WDR72Q3MJ13 1102 aa10.96□□□□□ -0.65
SYNE2-215ENST00000554997 SV2CQ496J9 727 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms