RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 PFDN1O60925 122 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 MMEP08473 750 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 CXCL8P10145 99 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ZNF484Q5JVG2 852 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 KAZNQ674X7 775 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ZCWPW1Q9H0M4 648 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 SLC40A1Q9NP59 571 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 L1RE1Q9UN81 338 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 LRRD1A4D1F6 860 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 P4HA2O15460 535 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 B4GALT5O43286 388 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 FKBP1BP68106 108 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 GRIK4Q16099 956 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 RSPH3Q86UC2 560 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 KCNV2Q8TDN2 545 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 RFFLQ8WZ73 363 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ACAP3Q96P50 834 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 MAFBQ9Y5Q3 323 aaPredicted RBP17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ATF7P17544 494 aaPredicted RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 GUCY1A3Q02108 690 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 IFT20Q8IY31 132 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 OSGEPQ9NPF4 335 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 TLDC2A0PJX2 215 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 KIAA0391O15091 583 aaKnown RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 MAFO75444 373 aaPredicted RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 FGGP02679 453 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 TNFSF9P41273 254 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 SEC24CP53992 1094 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 MARSP56192 900 aaKnown RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 TLK2Q86UE8 772 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 RBBP8NLQ8NC74 664 aaPredicted RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 FAM81BQ96LP2 452 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 FAM53CQ9NYF3 392 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 RASSF10A6NK89 507 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 PGRMC1O00264 195 aaKnown RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 SREBF2Q12772 1141 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 SLC9A9Q8IVB4 645 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 RHOT2Q8IXI1 618 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 ZNF564Q8TBZ8 553 aaPredicted RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 BEGAINQ9BUH8 593 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 RASAL2Q9UJF2 1139 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 ADGRA3Q8IWK6 1321 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 ZNF263O14978 683 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
PCNX1-209ENST00000554879 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 CACNA2D3Q8IZS8 1091 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 ANKS4BQ8N8V4 417 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 SHCBP1Q8NEM2 672 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 NSMCE1Q8WV22 266 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 SELENOSQ9BQE4 189 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
PCNX1-209ENST00000554879 DDX3XO00571 662 aaKnown RBP eCLIP17.6■□□□□ 0.417e-9■■□□□ 14.5
PCNX1-209ENST00000554879 HEXIM1O94992 359 aaKnown RBP17.6■□□□□ 0.41
PCNX1-209ENST00000554879 PDHA1P08559 390 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 OR6B3Q8NGW1 331 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 TMC2Q8TDI7 906 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 ESYT3A0FGR9 886 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-209ENST00000554879 MPZL3Q6UWV2 235 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 DHX33Q9H6R0 707 aaKnown RBP17.6■□□□□ 0.41
PCNX1-209ENST00000554879 KLK14Q9P0G3 267 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 UTRNP46939 3433 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.6■□□□□ 0.41
PCNX1-209ENST00000554879 PIK3R2O00459 728 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 NPTXRO95502 500 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 PSMC4P43686 418 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 MYL6P60660 151 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 FAM110CQ1W6H9 321 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 SCYL2Q6P3W7 929 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 LMNTD2Q8IXW0 634 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 HESX1Q9UBX0 185 aa17.6■□□□□ 0.41
PCNX1-209ENST00000554879 TTC36A6NLP5 189 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 GNAT1P11488 350 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 ADSSP30520 456 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 NNTQ13423 1086 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 LAMB3Q13751 1172 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 CCDC6Q16204 474 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 DNAJC24Q6P3W2 148 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 CCDC63Q8NA47 563 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 NUB1Q9Y5A7 615 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 LGR5O75473 907 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 ITGB3P05106 788 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 FOXR2Q6PJQ5 311 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 UTP11Q9Y3A2 253 aaKnown RBP17.59■□□□□ 0.41
PCNX1-209ENST00000554879 VIMP08670 466 aaKnown RBP17.59■□□□□ 0.41
PCNX1-209ENST00000554879 LDLRAD1Q5T700 205 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 ENOSF1Q7L5Y1 443 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 ERICH1Q86X53 443 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 BTBD6Q96KE9 485 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 ZMYM2Q9UBW7 1377 aa17.59■□□□□ 0.41
PCNX1-209ENST00000554879 CCDC189A1A4V9 331 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 TRAPPC11Q7Z392 1133 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 HACE1Q8IYU2 909 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 MAGOHBQ96A72 148 aaKnown RBP17.58■□□□□ 0.41
PCNX1-209ENST00000554879 ASIC3Q9UHC3 531 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms