RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 GRAP2O75791 330 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 NRLP54845 237 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ATL2Q8NHH9 583 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 CCT6BQ92526 530 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 EPB41L4BQ9H329 900 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
XRCC3-208ENST00000554811 DNPEPQ9ULA0 475 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ICAM1P05362 532 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 MAGEA4P43358 317 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 MMP13P45452 471 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
XRCC3-208ENST00000554811 PEX5P50542 639 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
XRCC3-208ENST00000554811 IL9RQ01113 521 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
XRCC3-208ENST00000554811 FOXR2Q6PJQ5 311 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ARHGEF18Q6ZSZ5 1173 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 PALM2Q8IXS6 379 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 EMC1Q8N766 993 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 ATP6V0A1Q93050 837 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 NLRP4Q96MN2 994 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 NPHS2Q9NP85 383 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 UVRAGQ9P2Y5 699 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 FBXO40Q9UH90 709 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 HAO1Q9UJM8 370 aa12.58□□□□□ -0.4
XRCC3-208ENST00000554811 TTC4O95801 387 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 GTF2H1P32780 548 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 YWHAGP61981 247 aaKnown RBP eCLIP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 CYP24A1Q07973 514 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 MCOLN2Q8IZK6 566 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 RSAD2Q8WXG1 361 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 SHC3Q92529 594 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 RMDN2Q96LZ7 410 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 MAGED2Q9UNF1 606 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 NEU2Q9Y3R4 380 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 F8VP50 259 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PIK3CDO00329 1044 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 EGFRP00533 1210 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PDHA1P08559 390 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 ELF1P32519 619 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PCK1P35558 622 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PGM5Q15124 567 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 CLUL1Q15846 466 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 CLEC16AQ2KHT3 1053 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 LRRC71Q8N4P6 559 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 ATXN2LQ8WWM7 1075 aaKnown RBP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 SLC7A3Q8WY07 619 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 TTC17Q96AE7 1141 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 ZBTB10Q96DT7 871 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PGM2Q96G03 612 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PDCD2LQ9BRP1 358 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PPP1R12CQ9BZL4 782 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 TRABDQ9H4I3 376 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 PICK1Q9NRD5 415 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 INO80B-WBP1J3KQ70 363 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 CLGNO14967 610 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 FAXCQ5TGI0 409 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
XRCC3-208ENST00000554811 INO80BQ9C086 356 aaPredicted RBP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 IQCGQ9H095 443 aaKnown RBP12.57□□□□□ -0.4
XRCC3-208ENST00000554811 CCDC195A0A1B0GUA6 201 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 PKN2Q16513 984 aaKnown RBP12.56□□□□□ -0.4
XRCC3-208ENST00000554811 C6orf89Q6UWU4 347 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 MFSD7Q6UXD7 560 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 RHPN2Q8IUC4 686 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 ADGRA3Q8IWK6 1321 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 DCLK3Q9C098 648 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 SNX3O60493 162 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 NUDT17P0C025 328 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 CETPP11597 493 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 ITIH2P19823 946 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 SLC8A1P32418 973 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-208ENST00000554811 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-208ENST00000554811 MPP2Q14168 576 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 PCNX4Q63HM2 1172 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 CCDC60Q8IWA6 550 aaPredicted RBP12.56□□□□□ -0.4
XRCC3-208ENST00000554811 AGAP11Q8TF27 550 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 WRNIP1Q96S55 665 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 RNF19AQ9NV58 838 aa12.56□□□□□ -0.4
XRCC3-208ENST00000554811 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms