RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 IQCEQ6IPM2 695 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 RINT1Q6NUQ1 792 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 POTEHQ6S545 545 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 PDZD4Q76G19 769 aaPredicted RBP13.64□□□□□ -0.23
RDH11-207ENST00000554731 APPL2Q8NEU8 664 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 TRMT61BQ9BVS5 477 aaKnown RBP13.64□□□□□ -0.23
RDH11-207ENST00000554731 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 BRD9Q9H8M2 597 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
RDH11-207ENST00000554731 PPP4R2Q9NY27 417 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 MAFFQ9ULX9 164 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
RDH11-207ENST00000554731 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 MAN2B1O00754 1011 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 TOM1L1O75674 476 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 FCARP24071 287 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 MARCKSP29966 332 aaPredicted RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 CDC25AP30304 524 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 PRPHP41219 470 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 CCR2P41597 374 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 GRM2Q14416 872 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 NOLC1Q14978 699 aaKnown RBP eCLIP13.63□□□□□ -0.239e-7■□□□□ 9.1
RDH11-207ENST00000554731 ZBTB44Q8NCP5 570 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 ZNF512Q96ME7 567 aaPredicted RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 NTPCRQ9BSD7 190 aaKnown RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 DLL3Q9NYJ7 618 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 AFF4Q9UHB7 1163 aaKnown RBP13.63□□□□□ -0.23
RDH11-207ENST00000554731 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 CITO14578 2027 aa13.63□□□□□ -0.23
RDH11-207ENST00000554731 MED19A0JLT2 244 aaPredicted RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 SFI1A8K8P3 1242 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 SEC24BO95487 1268 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 CPB1P15086 417 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 SMTNP53814 917 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 TWF1Q12792 350 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 DTHD1Q6ZMT9 781 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 LEMD2Q8NC56 503 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 DDX12PQ92771 950 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 NELL1Q92832 810 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 IRF7Q92985 503 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 FAM126AQ9BYI3 521 aaPredicted RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 PRMT8Q9NR22 394 aaPredicted RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 ASAH2Q9NR71 780 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
RDH11-207ENST00000554731 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
RDH11-207ENST00000554731 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 CLDN3O15551 220 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 LILRB5O75023 590 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 MYL4P12829 197 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 PLS3P13797 630 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 PSMC3P17980 439 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 GDI1P31150 447 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 MTAPQ13126 283 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 FZD5Q13467 585 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 IL17AQ16552 155 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 RSPO4Q2I0M5 234 aaPredicted RBP13.61□□□□□ -0.23
RDH11-207ENST00000554731 SEZ6Q53EL9 994 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 TSSK4Q6SA08 328 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 MAP4K3Q8IVH8 894 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 HS6ST3Q8IZP7 471 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 TMEM161BQ8NDZ6 487 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 DEPDC1BQ8WUY9 529 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 ZSWIM3Q96MP5 696 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 EPC1Q9H2F5 836 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 CHRDQ9H2X0 955 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 ZNF334Q9HCZ1 680 aaPredicted RBP13.61□□□□□ -0.23
RDH11-207ENST00000554731 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 CEP72Q9P209 647 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
RDH11-207ENST00000554731 DMXL1Q9Y485 3027 aa13.61□□□□□ -0.23
RDH11-207ENST00000554731 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
RDH11-207ENST00000554731 CLTAP09496 248 aa13.6□□□□□ -0.23
RDH11-207ENST00000554731 CXCL8P10145 99 aa13.6□□□□□ -0.23
RDH11-207ENST00000554731 MAPTP10636 758 aaKnown RBP13.6□□□□□ -0.23
RDH11-207ENST00000554731 SDHBP21912 280 aa13.6□□□□□ -0.23
RDH11-207ENST00000554731 MATR3P43243 847 aaKnown RBP eCLIP13.6□□□□□ -0.23
RDH11-207ENST00000554731 EPHA5P54756 1037 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms