RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 GCP02774 474 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 MXRA7P84157 204 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 GUCY1B3Q02153 619 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 KIF23Q02241 960 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-225ENST00000554214 EFCAB2Q5VUJ9 269 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 MIGA2Q7L4E1 593 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 MAPKAPK5Q8IW41 473 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 TMEM132CQ8N3T6 1108 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 RAB24Q969Q5 203 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 COA7Q96BR5 231 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 TEKT5Q96M29 485 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 IPPQ9Y573 584 aa6.24□□□□□ -1.41
ATXN3-225ENST00000554214 A0A1B0GTW7 788 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 CCDC154A6NI56 674 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
ATXN3-225ENST00000554214 HTRA2O43464 458 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-225ENST00000554214 CFIP05156 583 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ELANEP08246 267 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 CKBP12277 381 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ALAS1P13196 640 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ZEB1P37275 1124 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-225ENST00000554214 CTXN1P60606 82 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 KRT85P78386 507 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 TAP1Q03518 808 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATXN3-225ENST00000554214 IL10RAQ13651 578 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ODF1Q14990 250 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 PTPROQ16827 1216 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 LCORLQ8N3X6 602 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 TMX3Q96JJ7 454 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ADAM2Q99965 735 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 ZSWIM1Q9BR11 485 aa6.23□□□□□ -1.41
ATXN3-225ENST00000554214 STRCQ7RTU9 1775 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 GCSHP23434 173 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 EDNRBP24530 442 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 PURAQ00577 322 aaKnown RBP6.22□□□□□ -1.41
ATXN3-225ENST00000554214 TP53BP2Q13625 1128 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 ATP2B3Q16720 1220 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 FITM2Q8N6M3 262 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 MARS2Q96GW9 593 aaKnown RBP6.22□□□□□ -1.41
ATXN3-225ENST00000554214 AGAP2Q99490 1192 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 SLC13A1Q9BZW2 595 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 C11orf54Q9H0W9 315 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-225ENST00000554214 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 RNF181Q9P0P0 153 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 SPEF1Q9Y4P9 236 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 NOX1Q9Y5S8 564 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 ATP10BO94823 1461 aa6.22□□□□□ -1.41
ATXN3-225ENST00000554214 AATKQ6ZMQ8 1374 aa6.21□□□□□ -1.41
ATXN3-225ENST00000554214 CCDC78A2IDD5 438 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 MARCH11A6NNE9 402 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 SPDEFO95238 335 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 IBSPP21815 317 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 USP14P54578 494 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 CDC42EP1Q00587 391 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 C3orf36Q3SXR2 165 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 DACT2Q5SW24 774 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 B3GNTL1Q67FW5 361 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 ARMC6Q6NXE6 501 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 FOXR2Q6PJQ5 311 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 CMTR2Q8IYT2 770 aaKnown RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 FAM9AQ8IZU1 332 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 NLGN4YQ8NFZ3 816 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 GPR150Q8NGU9 434 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 TBC1D15Q8TC07 691 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 SMAD5Q99717 465 aaKnown RBP6.21□□□□□ -1.42
ATXN3-225ENST00000554214 ALOXE3Q9BYJ1 711 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 ASPSCR1Q9BZE9 553 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 HOMER2Q9NSB8 354 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 YEATS2Q9ULM3 1422 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 RAPGEF2Q9Y4G8 1499 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 ABCA9Q8IUA7 1624 aa6.21□□□□□ -1.42
ATXN3-225ENST00000554214 CTTNBP2Q8WZ74 1663 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 PIPSLA2A3N6 862 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 GRID2IPA4D2P6 1211 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 ANKRD62A6NC57 917 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 SGTAO43765 313 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 CDKL5O76039 1030 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 RHOBTB3O94955 611 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 GPANK1O95872 356 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-225ENST00000554214 FGFR4P22455 802 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 HSD11B2P80365 405 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 OCA2Q04671 838 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 UAP1L1Q3KQV9 507 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 CRB2Q5IJ48 1285 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 PPP4R3AQ6IN85 833 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 PCSK4Q6UW60 755 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 DCBLD1Q8N8Z6 715 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 SUPT20HQ8NEM7 779 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 IFI44Q8TCB0 444 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 KAT5Q92993 513 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 CLPTM1LQ96KA5 538 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 PCDHB1Q9Y5F3 818 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 FER1L4A9Z1Z3 1794 aa6.2□□□□□ -1.42
ATXN3-225ENST00000554214 ARHGEF40Q8TER5 1519 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms