RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RALGAPA2Q2PPJ7 1873 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 PVALEFA0A1B0GWK0 134 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 CASTOR2A6NHX0 329 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 PIGRP01833 764 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 PROZP22891 400 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 NRIP1P48552 1158 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 CREMQ03060 361 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 ZC2HC1CQ53FD0 456 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 FAM26FQ5R3K3 315 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 PDXDC1Q6P996 788 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 HS2ST1Q7LGA3 356 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 PPFIBP1Q86W92 1011 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 NOC3LQ8WTT2 800 aaKnown RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 ZBTB45Q96K62 511 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 TSPAN18Q96SJ8 248 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 BLZF1Q9H2G9 400 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 UBE2ZQ9H832 354 aaPredicted RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 MIOSQ9NXC5 875 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 DPP7Q9UHL4 492 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 ADAM28Q9UKQ2 775 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 AGO2Q9UKV8 859 aaKnown RBP9.07□□□□□ -0.96
PSEN1-209ENST00000553855 NUB1Q9Y5A7 615 aa9.07□□□□□ -0.96
PSEN1-209ENST00000553855 SMIM28A0A1B0GU29 152 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 FRMD3A2A2Y4 597 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 KIAA0391O15091 583 aaKnown RBP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 EIF3DO15371 548 aaKnown RBP eCLIP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 B3GAT3O94766 335 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 SOD2P04179 222 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 EDN1P05305 212 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 MYBP10242 640 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 CTSAP10619 480 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 KCNA5P22460 613 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 DNAJB1P25685 340 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 KLRC2P26717 231 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 IRS1P35568 1242 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 GLUD2P49448 558 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 AFF1P51825 1210 aaKnown RBP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 NDUFA8P51970 172 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 ERVFC1P60507 584 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 SH3BP2P78314 561 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 DSC1Q08554 894 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 PSMD2Q13200 908 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 USP41Q3LFD5 358 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 GLRA4Q5JXX5 417 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 ARMCX5Q6P1M9 558 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 FUT10Q6P4F1 479 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 CNNM4Q6P4Q7 775 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 DCLRE1AQ6PJP8 1040 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 EFHBQ8N7U6 833 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 CEP120Q8N960 986 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 MRPL43Q8N983 215 aaKnown RBP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 BEST2Q8NFU1 509 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 CASP10Q92851 521 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 PAGE5Q96GU1 130 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 SNX27Q96L92 541 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 HERC2P3Q9BVR0 1158 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 EGFL7Q9UHF1 273 aa9.06□□□□□ -0.96
PSEN1-209ENST00000553855 UBQLN1Q9UMX0 589 aaKnown RBP9.06□□□□□ -0.96
PSEN1-209ENST00000553855 UBE4BO95155 1302 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 COL4A4P53420 1690 aaPredicted RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 A0A0B4J269 797 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ARHGEF37A1IGU5 675 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 C2CD2LO14523 706 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 PTGESO14684 152 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 FSCN2O14926 492 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 PER2O15055 1255 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ZNF202O95125 648 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 IL18RAPO95256 599 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ADH1AP07327 375 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 CXCL8P10145 99 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 KCNE1P15382 129 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 GARTP22102 1010 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 RPL9P32969 192 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 SNRPFP62306 86 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 POU5F1Q01860 360 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 HYAL1Q12794 435 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 SEZ6Q53EL9 994 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 KRBA2Q6ZNG9 492 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 CEP57Q86XR8 500 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 GSTCDQ8NEC7 633 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 GOLGA5Q8TBA6 731 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 CACTINQ8WUQ7 758 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ASB2Q96Q27 587 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 FIZ1Q96SL8 496 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ZBP1Q9H171 429 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 ASB7Q9H672 318 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 KIAA1586Q9HCI6 787 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 PRDM6Q9NQX0 595 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 RMND1Q9NWS8 449 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 CNTN3Q9P232 1028 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 CGNQ9P2M7 1197 aaKnown RBP9.05□□□□□ -0.96
PSEN1-209ENST00000553855 HPSEQ9Y251 543 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 MYH15Q9Y2K3 1946 aa9.05□□□□□ -0.96
PSEN1-209ENST00000553855 FNDC1Q4ZHG4 1894 aaPredicted RBP9.04□□□□□ -0.96
PSEN1-209ENST00000553855 FAM237AA0A1B0GTK4 181 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 C2orf71A6NGG8 1288 aa9.04□□□□□ -0.96
PSEN1-209ENST00000553855 ANKRD63C9JTQ0 380 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms