RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MAGED2Q9UNF1 606 aaPredicted RBP9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 PCDHGA8Q9Y5G5 932 aa9.45□□□□□ -0.9
GTF2A1-203ENST00000553612 LRRC72A6NJI9 287 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FOXO3O43524 673 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 NOS1APO75052 506 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 RAD23AP54725 363 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 UBE2UQ5VVX9 321 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 LRRC39Q96DD0 335 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 PRRG3Q9BZD7 231 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 ASAP1Q9ULH1 1129 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 RAD51CO43502 376 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 BCL10O95999 233 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 HSPA6P17066 643 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 NEK3P51956 506 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 GALNT1Q10472 559 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 MTDHQ86UE4 582 aaKnown RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM13CQ8NE31 585 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 QKIQ96PU8 341 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 AIFM2Q9BRQ8 373 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 SENP6Q9GZR1 1112 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 CSRNP2Q9H175 543 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FAIMQ9NVQ4 179 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TOR4AQ9NXH8 423 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 PRKAG3Q9UGI9 489 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 CENPXA8MT69 81 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TNFAIP3P21580 790 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TTKP33981 857 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 GNG2P59768 71 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 AMPD2Q01433 879 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 NEDD8Q15843 81 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FUT11Q495W5 492 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TNNI3KQ59H18 835 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM209AQ5JX71 171 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 DPY19L2Q6NUT2 758 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 LRIG3Q6UXM1 1119 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 CDKL2Q92772 493 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 ABCB10Q9NRK6 738 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TOM1L1O75674 476 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FAM58BPP0C7Q3 252 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TPBGLP0DKB5 382 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 PLS3P13797 630 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 CMA1P23946 247 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 SNX17Q15036 470 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF423Q2M1K9 1284 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 IFIT1BQ5T764 474 aaKnown RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 LAYNQ6UX15 382 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 RUBCNQ92622 972 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 NCLNQ969V3 563 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 DNAJC11Q9NVH1 559 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FXR1P51114 621 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 SLC10A5Q5PT55 438 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 RDH13Q8NBN7 331 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 HERC2P3Q9BVR0 1158 aa9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.44□□□□□ -0.9
GTF2A1-203ENST00000553612 RNF113AO15541 343 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 OR7A10O76100 309 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 LPCAT4Q643R3 524 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ANKRD35Q8N283 1001 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 UBASH3BQ8TF42 649 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ZNF333Q96JL9 665 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 DIABLOQ9NR28 239 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TBCCD1Q9NVR7 557 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 BTBD18B2RXH4 712 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 K7EPI3 171 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 GLI1P08151 1106 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 HOXD13P35453 343 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SKIV2L2P42285 1042 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 EPS8L3Q8TE67 593 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 PAGE5Q96GU1 130 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 STX18Q9P2W9 335 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 RWDD2AQ9UIY3 292 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 FUOMA2VDF0 154 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TMEM191CA6NGB0 347 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 FGGP02679 453 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TMEM191BP0C7N4 346 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 NR4A2P43354 598 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 STX5Q13190 355 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 NME3Q13232 169 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 BYSLQ13895 437 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SF3B4Q15427 424 aaKnown RBP eCLIP9.43□□□□□ -0.92e-9■■■■■ 45.3
GTF2A1-203ENST00000553612 GSTA3Q16772 222 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 TICAM1Q8IUC6 712 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 PPP1R10Q96QC0 940 aaKnown RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 INO80BQ9C086 356 aaPredicted RBP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 GBA3Q9H227 469 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SNX12Q9UMY4 172 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 SESN1Q9Y6P5 492 aa9.43□□□□□ -0.9
GTF2A1-203ENST00000553612 PTPN23Q9H3S7 1636 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms