RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 CR1LQ2VPA4 569 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 ETV3LQ6ZN32 361 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 ARHGAP36Q6ZRI8 547 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 OTOP1Q7RTM1 612 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 ERO1BQ86YB8 467 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 FOXP4Q8IVH2 680 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-222ENST00000553570 FAM126BQ8IXS8 530 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 LCORLQ8N3X6 602 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 KBTBD3Q8NAB2 608 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 FEZF2Q8TBJ5 459 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 SH3RF2Q8TEC5 729 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 USP7Q93009 1102 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 DDX11Q96FC9 970 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 TTC1Q99614 292 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-222ENST00000553570 DHX36Q9H2U1 1008 aaKnown RBP5.54□□□□□ -1.52
ATXN3-222ENST00000553570 SLC6A20Q9NP91 592 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 HOMER2Q9NSB8 354 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 RNF186Q9NXI6 227 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 PI4KBQ9UBF8 816 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 ZHX2Q9Y6X8 837 aa5.54□□□□□ -1.52
ATXN3-222ENST00000553570 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 FLT1P17948 1338 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CCL15-CCL14A0A0B4J2E2 113 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 TRIM75PA6NK02 468 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 KCNK3O14649 394 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 GPR39O43194 453 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 BRINP1O60477 761 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 GAS7O60861 476 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 ZFYP08048 801 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 PDGFRBP09619 1106 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CYP2D6P10635 497 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 ADCYAP1R1P41586 468 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 TDO2P48775 406 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 INHBEP58166 350 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 UBE3CQ15386 1083 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CCL15Q16663 113 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CREB3L3Q68CJ9 461 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 FSTL4Q6MZW2 842 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 PTRH1Q86Y79 214 aaKnown RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CERS3Q8IU89 383 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 SMC5Q8IY18 1101 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CHTF18Q8WVB6 975 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 CHMP4CQ96CF2 233 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 EVI5LQ96CN4 794 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 SEC62Q99442 399 aaKnown RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 C11orf84Q9BUA3 381 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 IFT22Q9H7X7 185 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 TOMM22Q9NS69 142 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 THG1LQ9NWX6 298 aaKnown RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-222ENST00000553570 ZKSCAN5Q9Y2L8 839 aa5.53□□□□□ -1.52
ATXN3-222ENST00000553570 SSC5DA1L4H1 1573 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 MAN2B1O00754 1011 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 HGSO14964 777 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ZEB2O60315 1214 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 CYP2C8P10632 490 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 CETPP11597 493 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 TM4SF4P48230 202 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 PLCD1P51178 756 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 GUCY2FP51841 1108 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 IL2P60568 153 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 PPATQ06203 517 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SPP2Q13103 211 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SART3Q15020 963 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ARHGAP44Q17R89 818 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 STEAP3Q658P3 488 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SCYL3Q8IZE3 742 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 DYNLL2Q96FJ2 89 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 DIAPH3Q9NSV4 1193 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ATP8A2Q9NTI2 1148 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 RTEL1Q9NZ71 1219 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 H2AFY2Q9P0M6 372 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 STAP2Q9UGK3 403 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 DSEQ9UL01 958 aa5.52□□□□□ -1.53
ATXN3-222ENST00000553570 ISY1Q9ULR0 285 aaKnown RBP5.52□□□□□ -1.53
ATXN3-222ENST00000553570 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms