RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ANKMY2Q8IV38 441 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 DDIASQ8IXT1 998 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 OR6J1Q8NGC5 347 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CPA5Q8WXQ8 436 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SPON2Q9BUD6 331 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 TMEM117Q9H0C3 514 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SLC38A7Q9NVC3 462 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 EHD2Q9NZN4 543 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 KLHL2O95198 593 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CTDNEP1O95476 244 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SLC25A27O95847 323 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 GH1P01241 217 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 KCNA2P16389 499 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 LMBRD2Q68DH5 695 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SRLQ86TD4 932 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CARD9Q9H257 536 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 XPO7Q9UIA9 1087 aaKnown RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 IQSEC2Q5JU85 1478 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 FNTAP49354 379 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 RBBP7Q16576 425 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 TMEM259Q4ZIN3 620 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 SLC30A5Q8TAD4 765 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 GFM2Q969S9 779 aaKnown RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CYP4F11Q9HBI6 524 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 PCDHGB4Q9UN71 923 aa12.12□□□□□ -0.47
SYNE2-208ENST00000553289 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
SYNE2-208ENST00000553289 CEP152O94986 1710 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 NEMP1O14524 444 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 HLA-DRAP01903 254 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PYGLP06737 847 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 ACOT2P49753 483 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PTK2BQ14289 1009 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PDK1Q15118 436 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 IER5Q5VY09 327 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 CHST13Q8NET6 341 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 CEP70Q8NHQ1 597 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 RMDN1Q96DB5 314 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 STX18Q9P2W9 335 aaKnown RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PTPRMP28827 1452 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 ANGPT2O15123 496 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 RAD51CO43502 376 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 APRTP07741 180 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SPRP35270 261 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 LRRC8EQ6NSJ5 796 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 NT5C1AQ9BXI3 368 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 NIF3L1Q9GZT8 377 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 NDFIP2Q9NV92 336 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SNX9Q9Y5X1 595 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SLC9A1P19634 815 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 COMTP21964 271 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 OSBPL1AQ9BXW6 950 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 ZNF70Q9UC06 446 aaPredicted RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 GTF3C4Q9UKN8 822 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 RASSF10A6NK89 507 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 KCNQ2O43526 872 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PDHA1P08559 390 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
SYNE2-208ENST00000553289 KRT4P19013 534 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 PRKCEQ02156 737 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 ATPAF2Q8N5M1 289 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 TMEM143Q96AN5 459 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 ALG6Q9Y672 507 aa12.11□□□□□ -0.47
SYNE2-208ENST00000553289 KCNA1Q09470 495 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 SNX17Q15036 470 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 SV2CQ496J9 727 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 FIGNQ5HY92 759 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 C16orf87Q6PH81 154 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 RAB42Q8N4Z0 105 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 GPRASP2Q96D09 838 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 VPS33BQ9H267 617 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
SYNE2-208ENST00000553289 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms