RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 PRSS36Q5K4E3 855 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 ZBTB41Q5SVQ8 909 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 ZPBP2Q6X784 338 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 RNF19BQ6ZMZ0 732 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 TPRG1Q6ZUI0 275 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 PDZD4Q76G19 769 aaPredicted RBP12.51□□□□□ -0.41
NEK3-204ENST00000552973 TCEAL8Q8IYN2 117 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 MAML2Q8IZL2 1156 aaPredicted RBP12.51□□□□□ -0.41
NEK3-204ENST00000552973 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 LRRC15Q8TF66 581 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 ZSWIM3Q96MP5 696 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 DDX23Q9BUQ8 820 aaKnown RBP12.51□□□□□ -0.41
NEK3-204ENST00000552973 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 ZHX3Q9H4I2 956 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 LTB4R2Q9NPC1 389 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 HEBP1Q9NRV9 189 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 GDE1Q9NZC3 331 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 CEP72Q9P209 647 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 KCNG1Q9UIX4 513 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
NEK3-204ENST00000552973 LACTBL1A8MY62 500 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 UBA7P41226 1012 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 LIG4P49917 911 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 CSTF1Q05048 431 aaKnown RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 GRIN1Q05586 938 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 CYP4A22Q5TCH4 519 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 DSTYKQ6XUX3 929 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 GPBP1Q86WP2 473 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 GPIHBP1Q8IV16 184 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 DCLK2Q8N568 766 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 MYCT1Q8N699 235 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 ZNF512Q96ME7 567 aaPredicted RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 HINFPQ9BQA5 517 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 REEP2Q9BRK0 252 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 AVENQ9NQS1 362 aaPredicted RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 LARSQ9P2J5 1176 aaKnown RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 AFF4Q9UHB7 1163 aaKnown RBP12.5□□□□□ -0.41
NEK3-204ENST00000552973 SMC3Q9UQE7 1217 aa12.5□□□□□ -0.41
NEK3-204ENST00000552973 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 K7ENM7 598 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ZNF197O14709 1029 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 PPEF2O14830 753 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 LAMTOR5O43504 91 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 MOSPD3O75425 235 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 FAM13AO94988 1023 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 KRT18P05783 430 aaKnown RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 CLTAP09496 248 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 FCARP24071 287 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 VIPR2P41587 438 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ID4P47928 161 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 CDR1P51861 262 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 YWHAHQ04917 246 aaPredicted RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 PPP2R3AQ06190 1150 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 MCM6Q14566 821 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 KARSQ15046 597 aaKnown RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 ZBTB6Q15916 424 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 LARP1BQ659C4 914 aaKnown RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 ARL6IP4Q66PJ3 421 aaKnown RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 TSSK4Q6SA08 328 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 KIAA2013Q8IYS2 634 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ELMOD1Q8N336 334 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 CALML4Q96GE6 196 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 SEMA4AQ9H3S1 761 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 BRD9Q9H8M2 597 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 PLEKHA5Q9HAU0 1116 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ZFP14Q9HCL3 533 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 KCND2Q9NZV8 630 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 UBQLN1Q9UMX0 589 aaKnown RBP12.49□□□□□ -0.41
NEK3-204ENST00000552973 CACNA1HO95180 2353 aa12.49□□□□□ -0.41
NEK3-204ENST00000552973 ZFHX2Q9C0A1 2572 aaPredicted RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 USP34Q70CQ2 3546 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 H0YCG3 227 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 TRAK2O60296 914 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 LRPAP1P30533 357 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 DUSP4Q13115 394 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 TEAD2Q15562 447 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 ENOX2Q16206 610 aaKnown RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 ZC3H14Q6PJT7 736 aaKnown RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 ZNF852Q6ZMS4 543 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 USP37Q86T82 979 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 KCTD17Q8N5Z5 321 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 ASB16Q96NS5 453 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 MSTO1Q9BUK6 570 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 TRMT61BQ9BVS5 477 aaKnown RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 CRISPLD1Q9H336 500 aa12.48□□□□□ -0.41
NEK3-204ENST00000552973 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
NEK3-204ENST00000552973 BLOC1S4Q9NUP1 217 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms