RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 MCRS1Q96EZ8 462 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 BORCS6Q96GS4 357 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 CDK5RAP3Q96JB5 506 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 ACAP3Q96P50 834 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 NELL2Q99435 816 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 CYP4F11Q9HBI6 524 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 DDX19AQ9NUU7 478 aaKnown RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 GDE1Q9NZC3 331 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.88
TMEM116-217ENST00000552801 RAB23Q9ULC3 237 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 USP20Q9Y2K6 914 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 BACE2Q9Y5Z0 518 aa9.52□□□□□ -0.88
TMEM116-217ENST00000552801 I3L4J1 428 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 PODXLO00592 558 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 WNT7AO00755 349 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 RHOP08100 348 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 POU2F2P09086 479 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 TKTP29401 623 aaKnown RBP9.51□□□□□ -0.89
TMEM116-217ENST00000552801 MCM4P33991 863 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 DDIT3P35638 169 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 GRM5P41594 1212 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 STARD6P59095 220 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 CSTF1Q05048 431 aaKnown RBP9.51□□□□□ -0.89
TMEM116-217ENST00000552801 EEF1DP3Q658K8 133 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF852Q6ZMS4 543 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 DTHD1Q6ZMT9 781 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 TPRG1Q6ZUI0 275 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 DGLUCYQ7Z3D6 616 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 BICD1Q96G01 975 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF512Q96ME7 567 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-217ENST00000552801 CORO1BQ9BR76 489 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 SLITRK6Q9H5Y7 841 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 BRD9Q9H8M2 597 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 HCFC1R1Q9NWW0 138 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 ANKFY1Q9P2R3 1169 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 TRIP11Q15643 1979 aa9.51□□□□□ -0.89
TMEM116-217ENST00000552801 CITO14578 2027 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 SYN3O14994 580 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 SPTLC1O15269 473 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ADAM12O43184 909 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 RNF40O75150 1001 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ECI2O75521 394 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PAPLNO95428 1278 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 MCF2P10911 925 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 CPB1P15086 417 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 SDHBP21912 280 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 BRCC3P46736 316 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PDIA5Q14554 519 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 UPP1Q16831 310 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF280DQ6N043 979 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 USP37Q86T82 979 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 YAF2Q8IY57 180 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF461Q8TAF7 563 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PPP1R10Q96QC0 940 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 RPP25Q9BUL9 199 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 TIPINQ9BVW5 301 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 GOLGA2P5Q9HBQ8 144 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ZFP14Q9HCL3 533 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 POLD4Q9HCU8 107 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 DNMT3BQ9UBC3 853 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 FBXO4Q9UKT5 387 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 FAM186AA6NE01 2351 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 VWA8A3KMH1 1905 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 MYH11P35749 1972 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 DOCK6Q96HP0 2047 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 H0YCG3 227 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 LAD1O00515 517 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 MAN2B1O00754 1011 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 XPOTO43592 962 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 HIP1RO75146 1068 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 NPTX2P47972 431 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ROR1Q01973 937 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PLD1Q13393 1074 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 PUM1Q14671 1186 aaKnown RBP eCLIP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ZNF528Q3MIS6 628 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 MPZL3Q6UWV2 235 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 LEMD2Q8NC56 503 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 FBXO18Q8NFZ0 1043 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 RASSF8Q8NHQ8 419 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 CSGALNACT1Q8TDX6 532 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 IRF7Q92985 503 aa9.5□□□□□ -0.89
TMEM116-217ENST00000552801 ACO2Q99798 780 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 TRMT61BQ9BVS5 477 aaKnown RBP9.5□□□□□ -0.89
TMEM116-217ENST00000552801 TARS2Q9BW92 718 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms