RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 LBRQ14739 615 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 WDR72Q3MJ13 1102 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ATP13A4Q4VNC1 1196 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 GPATCH4Q5T3I0 446 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ISLR2Q6UXK2 745 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ARHGEF18Q6ZSZ5 1173 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 C1orf186Q6ZWK4 172 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 NLRP9Q7RTR0 991 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CCDC125Q86Z20 511 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 ZFPM1Q8IX07 1006 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 RHOT2Q8IXI1 618 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 AGGF1Q8N302 714 aaeCLIP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 LRRC8CQ8TDW0 803 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 SNF8Q96H20 258 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CLPTM1LQ96KA5 538 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CBWD1Q9BRT8 395 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 C10orf88Q9H8K7 445 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 WHRNQ9P202 907 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 LGALS13Q9UHV8 139 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 RABGAP1Q9Y3P9 1069 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 USH1CQ9Y6N9 552 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.15□□□□□ -1.58
LIMA1-214ENST00000552783 CNTNAP4Q9C0A0 1308 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 SBF2Q86WG5 1849 aa5.15□□□□□ -1.58
LIMA1-214ENST00000552783 IGKV6D-41A0A0C4DH26 115 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 A0A1W2PRG0 241 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GOLGA8IPA6NC78 632 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GOLGA8JA6NMD2 632 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MAGEB2O15479 319 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GRIN3BO60391 1043 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CDH16O75309 829 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 USP1O94782 785 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 SLITRK3O94933 977 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CFHP08603 1231 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 RALAP11233 206 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 KCNA3P22001 575 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ADSSP30520 456 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 SERPINB4P48594 390 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 NOP14P78316 857 aaKnown RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 BFSP1Q12934 665 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 PPP2R5CQ13362 524 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 SETDB1Q15047 1291 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ABCB5Q2M3G0 1257 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZC3H12AQ5D1E8 599 aaKnown RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 PCNX4Q63HM2 1172 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF720Q7Z2F6 126 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 LMNTD2Q8IXW0 634 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TAB3Q8N5C8 712 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 C12orf50Q8NA57 414 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 B4GALNT2Q8NHY0 566 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF526Q8TF50 670 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GATA6Q92908 595 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF653Q96CK0 615 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CSRNP1Q96S65 589 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GORASP1Q9BQQ3 440 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 AMNQ9BXJ7 453 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 DCLK3Q9C098 648 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 DMAC2Q9NW81 257 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ARMCX1Q9P291 453 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CENPFP49454 3210 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CYP3A7-CYP3A51PA0A087WV96 503 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 A0A0G2JND7 137 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 F5H6K3 240 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GOLGA8SH3BPF8 625 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GOLGA8MH3BSY2 632 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MAPK13O15264 365 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MMP10P09238 476 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 FDX1P10109 184 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 PYGBP11216 843 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ITIH2P19823 946 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CYP3A7P24462 503 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MARK3P27448 753 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CNGA1P29973 690 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GJC1P36383 396 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 CRKP46108 304 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 IL9RQ01113 521 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 GABPAQ06546 454 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TRAF1Q13077 416 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 LRRC6Q86X45 466 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 DAW1Q8N136 415 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 DRAXINQ8NBI3 349 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZNF75CPQ92670 426 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 INPP5DQ92835 1189 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 DYDC2Q96IM9 177 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MBOAT7Q96N66 472 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TUBGCP5Q96RT8 1024 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 RBM15Q96T37 977 aaKnown RBP eCLIP5.15□□□□□ -1.59
LIMA1-214ENST00000552783 WNT8AQ9H1J5 351 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TAOK3Q9H2K8 898 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TRABDQ9H4I3 376 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 TLE6Q9H808 572 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 SLC17A7Q9P2U7 560 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 ZFP69BQ9UJL9 534 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 MTUS1Q9ULD2 1270 aa5.15□□□□□ -1.59
LIMA1-214ENST00000552783 BPTFQ12830 3046 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 EXOC1LA0A1B0GW35 172 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TMEM150BA6NC51 233 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 E5RJQ4 531 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 GSC2O15499 205 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms