RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZNF395Q9H8N7 513 aaPredicted RBP9.37□□□□□ -0.91
PRIM1-208ENST00000552590 FAM105AQ9NUU6 356 aa9.37□□□□□ -0.91
PRIM1-208ENST00000552590 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
PRIM1-208ENST00000552590 COL5A1P20908 1838 aaPredicted RBP9.37□□□□□ -0.91
PRIM1-208ENST00000552590 NCANO14594 1321 aa9.37□□□□□ -0.91
PRIM1-208ENST00000552590 TRABD2BA6NFA1 517 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 B8ZZF3 427 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 KLRF2D3W0D1 207 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SPECC1L-ADORA2AF8WAN1 911 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 BACH1O14867 736 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SLC28A2O43868 658 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 ZNF862O60290 1169 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SKIP12755 728 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SLC26A2P50443 739 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 CSRP3P50461 194 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 MLLT6P55198 1093 aaPredicted RBP9.36□□□□□ -0.91
PRIM1-208ENST00000552590 HAND2P61296 217 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 USP41Q3LFD5 358 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 AXDND1Q5T1B0 1012 aaPredicted RBP9.36□□□□□ -0.91
PRIM1-208ENST00000552590 PMS2CLQ68D20 193 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 COLGALT2Q8IYK4 626 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SYNPOQ8N3V7 929 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 HDDC3Q8N4P3 179 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 LRRC71Q8N4P6 559 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 TCEAL4Q96EI5 215 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 ASB16Q96NS5 453 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 MAP7D2Q96T17 732 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 APOL6Q9BWW8 343 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 NUSAP1Q9BXS6 441 aaKnown RBP9.36□□□□□ -0.91
PRIM1-208ENST00000552590 SEMA4CQ9C0C4 833 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 C8orf33Q9H7E9 229 aaPredicted RBP9.36□□□□□ -0.91
PRIM1-208ENST00000552590 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
PRIM1-208ENST00000552590 EVLQ9UI08 416 aaPredicted RBP9.36□□□□□ -0.91
PRIM1-208ENST00000552590 MYBPHLA2RUH7 354 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 ZNF623O75123 536 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 RAB11FIP3O75154 756 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 ATP4AP20648 1035 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 CCR10P46092 362 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 DHPSP49366 369 aaPredicted RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 GPC3P51654 580 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 DHX9Q08211 1270 aaKnown RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 KARSQ15046 597 aaKnown RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 FUT10Q6P4F1 479 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 C1orf228Q6PIY5 440 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 SMARCC2Q8TAQ2 1214 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 MSANTD3Q96H12 275 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 ZSWIM3Q96MP5 696 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 CLSTN3Q9BQT9 956 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 PIN4Q9Y237 131 aaKnown RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 UBIAD1Q9Y5Z9 338 aa9.35□□□□□ -0.91
PRIM1-208ENST00000552590 MYH9P35579 1960 aaKnown RBP9.35□□□□□ -0.91
PRIM1-208ENST00000552590 IGKV6D-21A0A0A0MT36 114 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 ENO4A6NNW6 628 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 ADAM12O43184 909 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 ATG7O95352 703 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 POU2F2P09086 479 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 CD59P13987 128 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 CREMQ03060 361 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 TAF1BQ53T94 588 aaPredicted RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 PDXDC1Q6P996 788 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SLCO6A1Q86UG4 719 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 CCDC60Q8IWA6 550 aaPredicted RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 MFSD6LQ8IWD5 586 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 GPR65Q8IYL9 337 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 CAMKK1Q8N5S9 505 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 LINC01465Q8N7H1 131 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 DEPDC1BQ8WUY9 529 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SMARCD2Q92925 531 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 PGBD4Q96DM1 585 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 GTPBP2Q9BX10 602 aaKnown RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 RSAD1Q9HA92 442 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 PCDHB2Q9Y5E7 798 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 TSC2P49815 1807 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 NBASA2RRP1 2371 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 MUC22E2RYF6 1773 aaPredicted RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 TEX51A0A1B0GUA7 166 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 WDR27A2RRH5 827 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 SH3BP5O60239 455 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 FGAP02671 866 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 RLBP1P12271 317 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 BCKDHBP21953 392 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 RAB27AP51159 221 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 ATXN3P54252 364 aaPredicted RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 HNRNPDQ14103 355 aaKnown RBP9.34□□□□□ -0.91
PRIM1-208ENST00000552590 DBN1Q16643 649 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 ZKSCAN2Q63HK3 967 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 MFSD6Q6ZSS7 791 aa9.34□□□□□ -0.91
PRIM1-208ENST00000552590 TOGARAM2Q6ZUX3 1019 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms