RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 C9orf57Q5W0N0 161 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 PDE12Q6L8Q7 609 aaKnown RBP14.19□□□□□ -0.14
CDK4-212ENST00000552388 VPS52Q8N1B4 723 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 TMEM130Q8N3G9 435 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 PLEKHO2Q8TD55 490 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 PARD3BQ8TEW8 1205 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 SYAP1Q96A49 352 aaPredicted RBP14.19□□□□□ -0.14
CDK4-212ENST00000552388 CCDC127Q96BQ5 260 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 FNBP1Q96RU3 617 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 CGRRF1Q99675 332 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 HERC2P3Q9BVR0 1158 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 ZBP1Q9H171 429 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 CTNND2Q9UQB3 1225 aa14.19□□□□□ -0.14
CDK4-212ENST00000552388 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.148e-9■■■■■ 155.1
CDK4-212ENST00000552388 TMEM191BP0C7N4 346 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 CTSAP10619 480 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 TNNI1P19237 187 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 IRS1P35568 1242 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 DUOXA2Q1HG44 320 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 DPCR1Q3MIW9 517 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 LMBRD2Q68DH5 695 aaPredicted RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 CAVIN1Q6NZI2 390 aaKnown RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 FAM186BQ8IYM0 893 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 OR5B17Q8NGF7 314 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 CXorf38Q8TB03 319 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 HASPINQ8TF76 798 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 BORCS6Q96GS4 357 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 ANKRD36BP1Q96IX9 119 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 DUSP9Q99956 384 aaKnown RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 MTMR12Q9C0I1 747 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 NGRNQ9NPE2 291 aaKnown RBP14.18□□□□□ -0.14
CDK4-212ENST00000552388 CHST7Q9NS84 486 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 DACH1Q9UI36 760 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 RWDD2AQ9UIY3 292 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 IRAK3Q9Y616 596 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 PLXNA3P51805 1871 aa14.18□□□□□ -0.14
CDK4-212ENST00000552388 BRWD1Q9NSI6 2320 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 LRRIQ3A6PVS8 624 aaPredicted RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 SLC16A3O15427 465 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 TNNC2P02585 160 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 EPB41P11171 864 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 PAX3P23760 479 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 BRCC3P46736 316 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
CDK4-212ENST00000552388 AP3M2P53677 418 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 STX17P56962 302 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 BFSP1Q12934 665 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 SMC1AQ14683 1233 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 BMS1Q14692 1282 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 TAS1R1Q7RTX1 841 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 USP37Q86T82 979 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 GPR65Q8IYL9 337 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 EEF2KMTQ96G04 330 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 CEP63Q96MT8 703 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 MED15Q96RN5 788 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 POP1Q99575 1024 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 NSUN3Q9H649 340 aaKnown RBP14.17□□□□□ -0.14
CDK4-212ENST00000552388 C11orf16Q9NQ32 467 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 ENTPD7Q9NQZ7 604 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 ITGA11Q9UKX5 1188 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 NUB1Q9Y5A7 615 aa14.17□□□□□ -0.14
CDK4-212ENST00000552388 PPEF2O14830 753 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 IKBKBO14920 756 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 LILRB3O75022 631 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 ITGB3P05106 788 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 FGFR3P22607 806 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
CDK4-212ENST00000552388 POLR2BP30876 1174 aaKnown RBP14.16□□□□□ -0.14
CDK4-212ENST00000552388 GLUD2P49448 558 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 LILRA4P59901 499 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 DLG4P78352 724 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 DSG1Q02413 1049 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 PTPN14Q15678 1187 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 SKOR2Q2VWA4 1001 aaPredicted RBP14.16□□□□□ -0.14
CDK4-212ENST00000552388 C1orf220Q5T0J3 134 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 FAM171A1Q5VUB5 890 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 KIAA0319Q5VV43 1072 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 PLPP4Q5VZY2 271 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.16□□□□□ -0.14
CDK4-212ENST00000552388 TRAPPC11Q7Z392 1133 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 FILIP1Q7Z7B0 1213 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 MRPL43Q8N983 215 aaKnown RBP14.16□□□□□ -0.14
CDK4-212ENST00000552388 MICAL1Q8TDZ2 1067 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 ZNF516Q92618 1163 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 FAM84AQ96KN4 292 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
CDK4-212ENST00000552388 SSX2IPQ9Y2D8 614 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms