RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 ANK1P16157 1881 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 MAGEB2O15479 319 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 CFHP08603 1231 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 HOXC6P09630 235 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 PYGMP11217 842 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 RRM1P23921 792 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 ECHS1P30084 290 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 MAPK4P31152 587 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 ZNF132P52740 706 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 NOMO3P69849 1222 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 HLTFQ14527 1009 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 SGSM1Q2NKQ1 1148 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 AFG1LQ8WV93 481 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 VCPIP1Q96JH7 1222 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 SH3GL2Q99962 352 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 CELF4Q9BZC1 486 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 ANAPC7Q9UJX3 599 aa14.97□□□□□ -0.01
RAB3IP-216ENST00000552199 ZSWIM8A7E2V4 1837 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 THAP12O43422 761 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 OPA1O60313 960 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 B4GALT4O60513 344 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 SNAI1O95863 264 aaPredicted RBP14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 ADCYAP1R1P41586 468 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 PHKA2P46019 1235 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 RWDD2BP57060 319 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 FKBP1BP68106 108 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 TFAMQ00059 246 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 LIN9Q5TKA1 542 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 IQCKQ8N0W5 287 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 CDT1Q9H211 546 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 IFT122Q9HBG6 1241 aa14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 PRMT7Q9NVM4 692 aaPredicted RBP14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 UTP11Q9Y3A2 253 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-216ENST00000552199 FAM187AA6NFU0 413 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 DAPK3O43293 454 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 IQCF3P0C7M6 154 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 TMEM191BP0C7N4 346 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 HSPA9P38646 679 aaKnown RBP14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 DR1Q01658 176 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 TRPC3Q13507 836 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 DHX34Q14147 1143 aaKnown RBP14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 CFAP58Q5T655 872 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 SMYD5Q6GMV2 418 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 PPP1R2P3Q6NXS1 205 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 PASD1Q8IV76 773 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 EFCAB13Q8IY85 973 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 PRELID2Q8N945 189 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 NIF3L1Q9GZT8 377 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 FAM114A2Q9NRY5 505 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 COL1A2P08123 1366 aa14.96□□□□□ -0.02
RAB3IP-216ENST00000552199 MGAMO43451 1857 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 PHF2O75151 1096 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 TNNC2P02585 160 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 SLC1A1P43005 524 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 OSTNP61366 133 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 PHLDB2Q86SQ0 1253 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 DPP9Q86TI2 863 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 CDR2LQ86X02 465 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 SLC13A5Q86YT5 568 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 CEP120Q8N960 986 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 ANKRD36BP1Q96IX9 119 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 ZIM3Q96PE6 472 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 RUFY1Q96T51 708 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 C16orf70Q9BSU1 422 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 RAB17Q9H0T7 212 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 NEUROG2Q9H2A3 272 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 RPF1Q9H9Y2 349 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
RAB3IP-216ENST00000552199 A0A087WZ62 844 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 GOLGA8KD6RF30 607 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 MYO1FO00160 1098 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 IL18RAPO95256 599 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 CHRNA3P32297 505 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 SSTR3P32745 418 aaPredicted RBP14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 GRB14Q14449 540 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 AMHR2Q16671 573 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 C2CD6Q53TS8 623 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 ZDHHC14Q8IZN3 488 aa14.94□□□□□ -0.02
RAB3IP-216ENST00000552199 FDXACB1Q9BRP7 624 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms