RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 ASAP2O43150 1006 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 KALRNO60229 2985 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 BCKDHBP21953 392 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 CIITAP33076 1130 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 TNK2Q07912 1038 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 AAMPQ13685 434 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 PTPAQ15257 358 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 ITPRIPL2Q3MIP1 535 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 LRCH2Q5VUJ6 765 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 GPIHBP1Q8IV16 184 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 ARID3BQ8IVW6 561 aaPredicted RBP13.8□□□□□ -0.2
SNRPF-204ENST00000552085 SCUBE3Q8IX30 993 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 LRRC3BQ96PB8 259 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 IL25Q9H293 177 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 CEP72Q9P209 647 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 MBD1Q9UIS9 605 aaPredicted RBP13.8□□□□□ -0.2
SNRPF-204ENST00000552085 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
SNRPF-204ENST00000552085 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 DPYSL4O14531 572 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 PTGESO14684 152 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 NPTXRO95502 500 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 EGFP01133 1207 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 THP07101 528 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 FTH1P19P0C7X4 201 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
SNRPF-204ENST00000552085 TKTP29401 623 aaKnown RBP13.79□□□□□ -0.2
SNRPF-204ENST00000552085 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 DMC1Q14565 340 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 EXOC8Q8IYI6 725 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
SNRPF-204ENST00000552085 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 DHX33Q9H6R0 707 aaKnown RBP13.79□□□□□ -0.2
SNRPF-204ENST00000552085 BARHL2Q9NY43 387 aa13.79□□□□□ -0.2
SNRPF-204ENST00000552085 TMEM189-UBE2V1I3L0A0 370 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 TRDMT1O14717 391 aaKnown RBP13.78□□□□□ -0.2
SNRPF-204ENST00000552085 OPHN1O60890 802 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 PRKCBP05771 671 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 ABCG1P45844 678 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 ATXN3P54252 364 aaPredicted RBP13.78□□□□□ -0.2
SNRPF-204ENST00000552085 NPEPPSP55786 919 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 ARPP19P56211 112 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 PTENP60484 403 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 NUCB1Q02818 461 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 TWF1Q12792 350 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
SNRPF-204ENST00000552085 NAB2Q15742 525 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 MAPK6Q16659 721 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 SLC23A3Q6PIS1 610 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 FERMT3Q86UX7 667 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
SNRPF-204ENST00000552085 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 TPSD1Q9BZJ3 242 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 OBP2AQ9NY56 170 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
SNRPF-204ENST00000552085 A0A1W2PRU2 124 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-204ENST00000552085 PRC1O43663 620 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 CD59P13987 128 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 IGFBP6P24592 240 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-204ENST00000552085 AMHR2Q16671 573 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 SYT12Q8IV01 421 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
SNRPF-204ENST00000552085 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 BPIFB1Q8TDL5 484 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 GJA10Q969M2 543 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 GTPBP2Q9BX10 602 aaKnown RBP13.77□□□□□ -0.21
SNRPF-204ENST00000552085 RWDD1Q9H446 243 aaPredicted RBP13.77□□□□□ -0.21
SNRPF-204ENST00000552085 TMEM74BQ9NUR3 256 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
SNRPF-204ENST00000552085 CAPN8A6NHC0 703 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 TNFRSF10BO14763 440 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 CAPN9O14815 690 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 ADAMTS3O15072 1205 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 PSMD10O75832 226 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 B3GAT3O94766 335 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 RFC5P40937 340 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 PSMC5P62195 406 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 MBTD1Q05BQ5 628 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 FBXO43Q4G163 708 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 STXBP5Q5T5C0 1151 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 B4GALNT3Q6L9W6 998 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
SNRPF-204ENST00000552085 PIP4K2CQ8TBX8 421 aa13.76□□□□□ -0.21
SNRPF-204ENST00000552085 ACDQ96AP0 544 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms