RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 INSL5Q9Y5Q6 135 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 SYN3O14994 580 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 PFKPQ01813 784 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 ADCY1Q08828 1119 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 DTHD1Q6ZMT9 781 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 DDX12PQ92771 950 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 RAB34Q9BZG1 259 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 SH2B1Q9NRF2 756 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 ANKFY1Q9P2R3 1169 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 TIMM13Q9Y5L4 95 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 CEP250Q9BV73 2442 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 F5P12259 2224 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 CACNA1AO00555 2505 aa19.56■□□□□ 0.72
PRPF40B-215ENST00000551418 NCANO14594 1321 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 H7C4K7 107 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 LAMTOR5O43504 91 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 VNN2O95498 520 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 MAPTP10636 758 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 GUCY2CP25092 1073 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 RPL9P32969 192 aaKnown RBP19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 MCM4P33991 863 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 PRPHP41219 470 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 GUCY2FP51841 1108 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 ZBTB41Q5SVQ8 909 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 RNF19BQ6ZMZ0 732 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 ERMP1Q7Z2K6 904 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 CLDN23Q96B33 292 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 ELSPBP1Q96BH3 223 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 HINFPQ9BQA5 517 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 OSBPL6Q9BZF3 934 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 STK24Q9Y6E0 443 aa19.55■□□□□ 0.72
PRPF40B-215ENST00000551418 TOM1L1O75674 476 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 OR4Q2P0C623 313 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 CXCL8P10145 99 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 PLS3P13797 630 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 TNFSF9P41273 254 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 VIPR2P41587 438 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 TWF1Q12792 350 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 ARSHQ5FYA8 562 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 ZC3H14Q6PJT7 736 aaKnown RBP19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 ZNF687Q8N1G0 1237 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 LRRC15Q8TF66 581 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 SPIRE2Q8WWL2 714 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 RUBCNQ92622 972 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 COL4A2P08572 1712 aa19.54■□□□□ 0.72
PRPF40B-215ENST00000551418 TICRRQ7Z2Z1 1910 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 MED19A0JLT2 244 aaPredicted RBP19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 MYL4P12829 197 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 SLC12A3P55017 1021 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 ATP2C1P98194 919 aaPredicted RBP19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 NOLC1Q14978 699 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 HYIQ5T013 277 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 TPGS2Q68CL5 300 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 VITQ6UXI7 678 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 GPIHBP1Q8IV16 184 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 SYT2Q8N9I0 419 aaPredicted RBP19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 ASB16Q96NS5 453 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 CRISPLD1Q9H336 500 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 C17orf75Q9HAS0 396 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 FBXO4Q9UKT5 387 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 PCDHB8Q9UN66 801 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 ANK1P16157 1881 aa19.53■□□□□ 0.72
PRPF40B-215ENST00000551418 LAD1O00515 517 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 PPEF2O14830 753 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 KINO60870 393 aaKnown RBP19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 PLA2G4BP0C869 781 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 MCL1Q07820 350 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 STRN3Q13033 797 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 ZBTB6Q15916 424 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 ZNF528Q3MIS6 628 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 ZNF852Q6ZMS4 543 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 PDZD4Q76G19 769 aaPredicted RBP19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 RSPRY1Q96DX4 576 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 PGLYRP2Q96PD5 576 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 ZFP14Q9HCL3 533 aa19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 DAXXQ9UER7 740 aaPredicted RBP19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 AFF4Q9UHB7 1163 aaKnown RBP19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 NDRG2Q9UN36 371 aaKnown RBP19.52■□□□□ 0.72
PRPF40B-215ENST00000551418 TTC26A0AVF1 554 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 VWA3AA6NCI4 1184 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 LACTBL1A8MY62 500 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 CLDN3O15551 220 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 CDR1P51861 262 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 MTAPQ13126 283 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 TEAD2Q15562 447 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 ZNF280DQ6N043 979 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 ZPBP2Q6X784 338 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 MAP4K3Q8IVH8 894 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 NELL1Q92832 810 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 ZNF512Q96ME7 567 aaPredicted RBP19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 TRMT61BQ9BVS5 477 aaKnown RBP19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 LRRC3Q9BY71 257 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 BRD9Q9H8M2 597 aa19.51■□□□□ 0.71
PRPF40B-215ENST00000551418 M0QZQ0 153 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 ZNF197O14709 1029 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 MICAL2O94851 1124 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 CPB1P15086 417 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 GDI1P31150 447 aa19.5■□□□□ 0.71
PRPF40B-215ENST00000551418 MATR3P43243 847 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms