RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ZNF699Q32M78 642 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 ZNF394Q53GI3 561 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 GDF6Q6KF10 455 aaPredicted RBP21.1■□□□□ 0.97
SSH1-209ENST00000551165 RFFLQ8WZ73 363 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 MS4A14Q96JA4 679 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 ACAP3Q96P50 834 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 MTG1Q9BT17 334 aaPredicted RBP21.1■□□□□ 0.97
SSH1-209ENST00000551165 NXF1Q9UBU9 619 aaKnown RBP21.1■□□□□ 0.97
SSH1-209ENST00000551165 ASPAP45381 313 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 FAM81BQ96LP2 452 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 ADPGKQ9BRR6 497 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 XPNPEP3Q9NQH7 507 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 CNTN6Q9UQ52 1028 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 PCDHB2Q9Y5E7 798 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 MROH7Q68CQ1 1323 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 TRIP11Q15643 1979 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 BUB1BO60566 1050 aaPredicted RBP21.09■□□□□ 0.97
SSH1-209ENST00000551165 TBXAS1P24557 533 aaPredicted RBP21.09■□□□□ 0.97
SSH1-209ENST00000551165 RAP1GAPP47736 663 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 C2CD6Q53TS8 623 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 GOLGA1Q92805 767 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 NIF3L1Q9GZT8 377 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 SCN10AQ9Y5Y9 1956 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 CTAGE15A4D2H0 777 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 CTAGE8P0CG41 777 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 GZMAP12544 262 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 APLP1P51693 650 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 CTAGE6Q86UF2 777 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 PASD1Q8IV76 773 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 CTAGE4Q8IX94 777 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 CPA5Q8WXQ8 436 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 NXF3Q9H4D5 531 aaKnown RBP21.09■□□□□ 0.97
SSH1-209ENST00000551165 CISHQ9NSE2 258 aa21.09■□□□□ 0.97
SSH1-209ENST00000551165 ASGR1P07306 291 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 GRM5P41594 1212 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 CDH8P55286 799 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 KCNA10Q16322 511 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 CLEC16AQ2KHT3 1053 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 FAM47CQ5HY64 1035 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 SLC27A1Q6PCB7 646 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 CYFIP2Q96F07 1278 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 ZMAT2Q96NC0 199 aaKnown RBP21.08■□□□□ 0.97
SSH1-209ENST00000551165 ASB7Q9H672 318 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 SRRDQ9UH36 339 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 GTF2IRD1Q9UHL9 959 aa21.08■□□□□ 0.97
SSH1-209ENST00000551165 CITO14578 2027 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 PRLRP16471 622 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 GNA15P30679 374 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 CDC42EP1Q00587 391 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 LLGL2Q6P1M3 1020 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 FBXO38Q6PIJ6 1188 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 SLFN11Q7Z7L1 901 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 PHLDB2Q86SQ0 1253 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 DAAM2Q86T65 1068 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 ZSWIM1Q9BR11 485 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 SDCBP2Q9H190 292 aa21.08■□□□□ 0.96
SSH1-209ENST00000551165 PIN4Q9Y237 131 aaKnown RBP21.08■□□□□ 0.96
SSH1-209ENST00000551165 GRIN2DO15399 1336 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 UNGP13051 313 aaPredicted RBP21.07■□□□□ 0.96
SSH1-209ENST00000551165 AKAP5P24588 427 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 VEGFBP49765 207 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 ZNF132P52740 706 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 GPC5P78333 572 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 TMEM132DQ14C87 1099 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 WDR72Q3MJ13 1102 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 ACAD10Q6JQN1 1059 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 APOL6Q9BWW8 343 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 CASP8AP2Q9UKL3 1982 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 GNAT1P11488 350 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 POLR2BP30876 1174 aaKnown RBP21.07■□□□□ 0.96
SSH1-209ENST00000551165 NOTUMQ6P988 496 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 CAGE1Q8TC20 777 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 OSBPL7Q9BZF2 842 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 SPC25Q9HBM1 224 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 STXBP5LQ9Y2K9 1186 aa21.07■□□□□ 0.96
SSH1-209ENST00000551165 KPNA6O60684 536 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 TCP1P17987 556 aaKnown RBP21.06■□□□□ 0.96
SSH1-209ENST00000551165 CRYBB1P53674 252 aaPredicted RBP21.06■□□□□ 0.96
SSH1-209ENST00000551165 ORC1Q13415 861 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 DCAF4L1Q3SXM0 396 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 GLRA4Q5JXX5 417 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 NAA35Q5VZE5 725 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 NT5DC3Q86UY8 548 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 KIF12Q96FN5 646 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 BTBD6Q96KE9 485 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 RNF216Q9NWF9 866 aaPredicted RBP21.06■□□□□ 0.96
SSH1-209ENST00000551165 CTTNBP2NLQ9P2B4 639 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 AGAP1Q9UPQ3 857 aa21.06■□□□□ 0.96
SSH1-209ENST00000551165 RHOXF2BP0C7M4 288 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 RNASE9P60153 205 aaKnown RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 C2orf54Q08AI8 447 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 IFI16Q16666 785 aaKnown RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 UBXN11Q5T124 520 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 CCSAPQ6IQ19 270 aaPredicted RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 CPNE8Q86YQ8 564 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 RHOXF2Q9BQY4 288 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 CCDC94Q9BW85 323 aaPredicted RBP21.05■□□□□ 0.96
SSH1-209ENST00000551165 SMYD3Q9H7B4 428 aa21.05■□□□□ 0.96
SSH1-209ENST00000551165 ANKZF1Q9H8Y5 726 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms