RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GBA2Q9HCG7 927 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-214ENST00000550893 CNNM1Q9NRU3 951 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 ALPK3Q96L96 1907 aa6.01□□□□□ -1.45
SCAF11-214ENST00000550893 GAKO14976 1311 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 SALL1Q9NSC2 1324 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 DNAH12Q6ZR08 3092 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 FRMPD3Q5JV73 1810 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 PTPDC1A2A3K4 754 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 PATE3B3GLJ2 98 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 H7C1D1 291 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 HMGCRP04035 888 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 JMJD7P0C870 316 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 UBTFL1P0CB47 393 aaPredicted RBP6□□□□□ -1.45
SCAF11-214ENST00000550893 CACNB3P54284 484 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 HUNKP57058 714 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 MOGSQ13724 837 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
SCAF11-214ENST00000550893 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF568Q3ZCX4 644 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 ZMAT1Q5H9K5 638 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 METTL24Q5JXM2 366 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 MFSD14BQ5SR56 506 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 TMEM200BQ69YZ2 307 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF804AQ7Z570 1209 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 RTN4RL1Q86UN2 441 aaPredicted RBP6□□□□□ -1.45
SCAF11-214ENST00000550893 DVL3Q92997 716 aaPredicted RBP6□□□□□ -1.45
SCAF11-214ENST00000550893 NEIL1Q96FI4 390 aaPredicted RBP6□□□□□ -1.45
SCAF11-214ENST00000550893 BORCS6Q96GS4 357 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 SCYL1Q96KG9 808 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 WWC2-AS2Q96NR7 200 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 KIAA1683Q9H0B3 1180 aa6□□□□□ -1.45
SCAF11-214ENST00000550893 PDS5AQ29RF7 1337 aaKnown RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 COL2A1P02458 1487 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 A0A0G2JNJ9 132 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 UBE2Q2LH0YL09 131 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 HIBADHP31937 336 aaKnown RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 MCAMP43121 646 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 KIF11P52732 1056 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 LBX1P52954 281 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 RAC3P60763 192 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 TFCP2Q12800 502 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 TBR1Q16650 682 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ATP2B3Q16720 1220 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 CDCA2Q69YH5 1023 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 TRIM68Q6AZZ1 485 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 CEP85Q6P2H3 762 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 UBE2R2Q712K3 238 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ADGRA1Q86SQ6 560 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 TAX1BP1Q86VP1 789 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ZFPM1Q8IX07 1006 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 SYNPOQ8N3V7 929 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 CALML6Q8TD86 181 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 TMEM39BQ9GZU3 492 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 CABP5Q9NP86 173 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 DDX4Q9NQI0 724 aaKnown RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF70Q9UC06 446 aaPredicted RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 Q9UFV3 132 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ABT1Q9ULW3 272 aaKnown RBP5.99□□□□□ -1.45
SCAF11-214ENST00000550893 MYRFQ9Y2G1 1151 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 PDE4DIPQ5VU43 2346 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 ADGRA2Q96PE1 1338 aa5.99□□□□□ -1.45
SCAF11-214ENST00000550893 SZT2Q5T011 3432 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 A0A1B0GUL7 405 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 CBX4O00257 560 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 FOXS1O43638 330 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF623O75123 536 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 APEX1P27695 318 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 FLT3P36888 993 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 FNTBP49356 437 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 RHBDL3P58872 404 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 TIMM10P62072 90 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 KIF23Q02241 960 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 ALDH6A1Q02252 535 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 PUM1Q14671 1186 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 RRP1BQ14684 758 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 CDSNQ15517 529 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 TCEA2Q15560 299 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 TKFCQ3LXA3 575 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 ZKSCAN2Q63HK3 967 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 GRAMD4Q6IC98 578 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 TCTN3Q6NUS6 607 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 RGMBQ6NW40 437 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 ZNF585AQ6P3V2 769 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 GIMAP8Q8ND71 665 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 Q8TCH9 128 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 LPIN2Q92539 896 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 KLC2Q9H0B6 622 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 DEFB129Q9H1M3 183 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 DEF6Q9H4E7 631 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 TDRD3Q9H7E2 651 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 ACSS2Q9NR19 701 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 FANCLQ9NW38 375 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 MAGEC2Q9UBF1 373 aaPredicted RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 B4GALT6Q9UBX8 382 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 DBNLQ9UJU6 430 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 NOP58Q9Y2X3 529 aaKnown RBP5.98□□□□□ -1.45
SCAF11-214ENST00000550893 NR2E1Q9Y466 385 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 LAMA3Q16787 3333 aa5.98□□□□□ -1.45
SCAF11-214ENST00000550893 COL11A1P12107 1806 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms