RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 EFCAB13Q8IY85 973 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CEP120Q8N960 986 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 MYRIPQ8NFW9 859 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 TRIM11Q96F44 468 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 SNX27Q96L92 541 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 UBQLN1Q9UMX0 589 aaKnown RBP13.48□□□□□ -0.25
CACNB3-217ENST00000550483 JRKLQ9Y4A0 524 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CACNB3-217ENST00000550483 EVPLQ92817 2033 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 A0A0U1RQG5 324 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 ANKRD62A6NC57 917 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 RTN2O75298 545 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 RPS6KA5O75582 802 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 CLSTN1O94985 981 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 CD4P01730 458 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 KRT5P13647 590 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 CYP3A5P20815 502 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 OSTNP61366 133 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF200P98182 395 aaPredicted RBP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 MYO1EQ12965 1108 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 GLYCTKQ8IVS8 523 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 RHOT2Q8IXI1 618 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 SYCE1Q8N0S2 351 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 LRRC52Q8N7C0 313 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 TATDN2Q93075 761 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 LACRTQ9GZZ8 138 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 NOCTQ9UK39 431 aaKnown RBP13.47□□□□□ -0.25
CACNB3-217ENST00000550483 PHF24Q9UPV7 400 aa13.47□□□□□ -0.25
CACNB3-217ENST00000550483 NCANO14594 1321 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 CSDE1O75534 798 aaKnown RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 URI1O94763 535 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 NFICP08651 508 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 MYBL1P10243 752 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 KCNE1P15382 129 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 PRLRP16471 622 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 CAPN2P17655 700 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 ACO1P21399 889 aaKnown RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 PNPLA4P41247 253 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 MYL6P60660 151 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 LHX8Q68G74 356 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 CDR2LQ86X02 465 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 UBR7Q8N806 425 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 C1orf127Q8N9H9 656 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 SLC43A3Q8NBI5 491 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 ZNF560Q96MR9 790 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 WDR24Q96S15 920 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 XYLT2Q9H1B5 865 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 ISCUQ9H1K1 167 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 APOBEC3GQ9HC16 384 aaKnown RBP13.46□□□□□ -0.25
CACNB3-217ENST00000550483 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
CACNB3-217ENST00000550483 RALGAPA2Q2PPJ7 1873 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 MACROD2A1Z1Q3 448 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 DNM1LO00429 736 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 TLR3O15455 904 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 MED7O43513 233 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 SLU7O95391 586 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 KRT19P08727 400 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 PAEPP09466 180 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 PAX3P23760 479 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 HADHBP55084 474 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 ALKAL1Q6UXT8 129 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 NOP9Q86U38 636 aaKnown RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 CEP112Q8N8E3 955 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
CACNB3-217ENST00000550483 CAGE1Q8TC20 777 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 TMEM40Q8WWA1 233 aa13.45□□□□□ -0.26
CACNB3-217ENST00000550483 KAT5Q92993 513 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms