RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 C1orf167Q5SNV9 1468 aa12.83□□□□□ -0.36
VDR-208ENST00000550325 SLC16A3O15427 465 aaKnown RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 CD58P19256 250 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 DDB1Q16531 1140 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 SLC45A4Q5BKX6 768 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ACBD5Q5T8D3 534 aaPredicted RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 SPATA16Q9BXB7 569 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 PPARGC1AQ9UBK2 798 aaKnown RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 MARCOQ9UEW3 520 aaPredicted RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 GOLGA8IPA6NC78 632 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 GOLGA8JA6NMD2 632 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 TISP43B9A030 160 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 PI4K2BG5E9Z4 385 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 PGM3O95394 542 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 SETSIPP0DME0 302 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 BMP3P12645 472 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 OCRLQ01968 901 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 CEP70Q8NHQ1 597 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 NEDD1Q8NHV4 660 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 TIPINQ9BVW5 301 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 TMEM120AQ9BXJ8 343 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ANO3Q9BYT9 981 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 NEU2Q9Y3R4 380 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 PNMA6FA0A0J9YX94 578 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ESYT2A0FGR8 921 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 CYP1A1P04798 512 aaPredicted RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 ETS1P14921 441 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 POLD1P28340 1107 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 NR1H3Q13133 447 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 LIN52Q52LA3 116 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ARHGAP24Q8N264 748 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 GPR88Q9GZN0 384 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 KRT82Q9NSB4 513 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 NOP9Q86U38 636 aaKnown RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 SPATA24Q86W54 205 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ARHGAP18Q8N392 663 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 CCDC124Q96CT7 223 aaKnown RBP12.82□□□□□ -0.36
VDR-208ENST00000550325 TSSK1BQ9BXA7 367 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 FAM192AQ9GZU8 254 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 LRRC19Q9H756 370 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ZWILCHQ9H900 591 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 TAS2R1Q9NYW7 299 aa12.82□□□□□ -0.36
VDR-208ENST00000550325 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 FGFR1P11362 822 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 HOXA7P31268 230 aaPredicted RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 PDIA2Q13087 525 aaKnown RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 SIX1Q15475 284 aaPredicted RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 RGS9BPQ6ZS82 235 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 ZNF804AQ7Z570 1209 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 CCDC89Q8N998 374 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 RILPQ96NA2 401 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 HERPUD2Q9BSE4 406 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 MAK16Q9BXY0 300 aaKnown RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 GLI3P10071 1580 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 OR6B1O95007 311 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 HNRNPCP07910 306 aaKnown RBP eCLIP12.81□□□□□ -0.36
VDR-208ENST00000550325 GPS1Q13098 491 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 EFTUD2Q15029 972 aaKnown RBP eCLIP12.81□□□□□ -0.36
VDR-208ENST00000550325 MYLK4Q86YV6 388 aaPredicted RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 TMEM117Q9H0C3 514 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 STX18Q9P2W9 335 aaKnown RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 SMG5Q9UPR3 1016 aaKnown RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 CCDC195A0A1B0GUA6 201 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
VDR-208ENST00000550325 UBXN2AP68543 259 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 BTKQ06187 659 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 SYCP2LQ5T4T6 812 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 TCP10LQ8TDR4 215 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 GATA6Q92908 595 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 DCLK3Q9C098 648 aa12.81□□□□□ -0.36
VDR-208ENST00000550325 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
VDR-208ENST00000550325 C2CD2LO14523 706 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 MYL2P10916 166 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 DESP17661 470 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 EPHB1P54762 984 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 MYBPC3Q14896 1274 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 ALYREFQ86V81 257 aaKnown RBP12.8□□□□□ -0.36
VDR-208ENST00000550325 CYP2W1Q8TAV3 490 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 MANSC1Q9H8J5 431 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SLC17A7Q9P2U7 560 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 GTPBP10A4D1E9 387 aaKnown RBP12.8□□□□□ -0.36
VDR-208ENST00000550325 SIGLEC16A6NMB1 481 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 TP73O15350 636 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 AKR1B1P15121 316 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 BFSP1Q12934 665 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SATL1Q86VE3 508 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms