RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 SCN1AP35498 2009 aa13.78□□□□□ -0.2
LETMD1-222ENST00000550274 SPAG17Q6Q759 2223 aa13.78□□□□□ -0.2
LETMD1-222ENST00000550274 ACACBO00763 2458 aa13.78□□□□□ -0.2
LETMD1-222ENST00000550274 KMT2BQ9UMN6 2715 aaPredicted RBP13.77□□□□□ -0.2
LETMD1-222ENST00000550274 NCANO14594 1321 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 OBSL1O75147 1896 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 MCF2P10911 925 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 HARSP12081 509 aaKnown RBP13.77□□□□□ -0.21
LETMD1-222ENST00000550274 CDC25AP30304 524 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
LETMD1-222ENST00000550274 PTGDRQ13258 359 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 DMP1Q13316 513 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-222ENST00000550274 IL17AQ16552 155 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 RINT1Q6NUQ1 792 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 MPZL3Q6UWV2 235 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 HS6ST3Q8IZP7 471 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 DNASE1L2Q92874 299 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 NELL2Q99435 816 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 LLPHQ9BRT6 129 aaKnown RBP13.77□□□□□ -0.21
LETMD1-222ENST00000550274 KMT5AQ9NQR1 393 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 PRMT8Q9NR22 394 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ZSCAN32Q9NX65 697 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 NCDNQ9UBB6 729 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 NUB1Q9Y5A7 615 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 CHD8Q9HCK8 2581 aa13.77□□□□□ -0.21
LETMD1-222ENST00000550274 ATG2BQ96BY7 2078 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 H7C4K7 107 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 SLC16A4O15374 487 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 LILRB5O75023 590 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 MOSPD3O75425 235 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 ADCY1Q08828 1119 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 MTAPQ13126 283 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 GNL2Q13823 731 aaKnown RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 PDIA5Q14554 519 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 RSPO4Q2I0M5 234 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 SEZ6Q53EL9 994 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 VITQ6UXI7 678 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 C1orf186Q6ZWK4 172 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 SUSD3Q96L08 255 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 ASB16Q96NS5 453 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 TCHPQ9BT92 498 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 EPC1Q9H2F5 836 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 BRD9Q9H8M2 597 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 ZFP14Q9HCL3 533 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 CEP72Q9P209 647 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 NOL7Q9UMY1 257 aaKnown RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 SMG5Q9UPR3 1016 aaKnown RBP13.76□□□□□ -0.21
LETMD1-222ENST00000550274 DNM3Q9UQ16 869 aa13.76□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF197O14709 1029 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 NCAM2O15394 837 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 MICAL2O94851 1124 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 GJA1P17302 382 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 RPL9P32969 192 aaKnown RBP13.75□□□□□ -0.21
LETMD1-222ENST00000550274 MCM4P33991 863 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 TWF1Q12792 350 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 SLC10A6Q3KNW5 377 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 DDX12PQ92771 950 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 TRMT61BQ9BVS5 477 aaKnown RBP13.75□□□□□ -0.21
LETMD1-222ENST00000550274 ANKFY1Q9P2R3 1169 aa13.75□□□□□ -0.21
LETMD1-222ENST00000550274 MRPS17Q9Y2R5 130 aaKnown RBP13.75□□□□□ -0.21
LETMD1-222ENST00000550274 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
LETMD1-222ENST00000550274 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 EML5Q05BV3 1969 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 SDK1Q7Z5N4 2213 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 VNN2O95498 520 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 MYL4P12829 197 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 TDGF1P13385 188 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 GDI1P31150 447 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 VIPR2P41587 438 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 EPHA5P54756 1037 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 SPAG1Q07617 926 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 RAD51AP2Q09MP3 1159 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 NOLC1Q14978 699 aaKnown RBP eCLIP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 CYP4A22Q5TCH4 519 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 KRT79Q5XKE5 535 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 MAP4K3Q8IVH8 894 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 FAM184AQ8NB25 1140 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 SMARCD2Q92925 531 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms