RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RPL9P32969 192 aaKnown RBP16.85■□□□□ 0.29
RAB5C-205ENST00000550013 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
RAB5C-205ENST00000550013 KRT79Q5XKE5 535 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 SUSD3Q96L08 255 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 ZSWIM3Q96MP5 696 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 NELL2Q99435 816 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 ANKFY1Q9P2R3 1169 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 TUBGCP4Q9UGJ1 667 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 NDRG2Q9UN36 371 aaKnown RBP16.85■□□□□ 0.29
RAB5C-205ENST00000550013 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
RAB5C-205ENST00000550013 PCDHGA2Q9Y5H1 932 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 STK24Q9Y6E0 443 aa16.85■□□□□ 0.29
RAB5C-205ENST00000550013 SPTBN2O15020 2390 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 U2AF2P26368 475 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAB5C-205ENST00000550013 MCM4P33991 863 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 RPS9P46781 194 aaKnown RBP16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ADCY1Q08828 1119 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 RAD51AP2Q09MP3 1159 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 PUM1Q14671 1186 aaKnown RBP eCLIP16.84■□□□□ 0.29
RAB5C-205ENST00000550013 SLC10A6Q3KNW5 377 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 TPGS2Q68CL5 300 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ZNF280DQ6N043 979 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ZBTB44Q8NCP5 570 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ATRIPQ8WXE1 791 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 DDX12PQ92771 950 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 DNASE1L2Q92874 299 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ASB16Q96NS5 453 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 BRD9Q9H8M2 597 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ZFP14Q9HCL3 533 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 PRMT8Q9NR22 394 aaPredicted RBP16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ZSCAN32Q9NX65 697 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 DLL3Q9NYJ7 618 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 CEP72Q9P209 647 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 NCDNQ9UBB6 729 aa16.84■□□□□ 0.29
RAB5C-205ENST00000550013 ZNF197O14709 1029 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 NCAM2O15394 837 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 MOSPD3O75425 235 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 GJA1P17302 382 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 TWF1Q12792 350 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 MTAPQ13126 283 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 NOLC1Q14978 699 aaKnown RBP eCLIP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 RSPO4Q2I0M5 234 aaPredicted RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 CYP4A22Q5TCH4 519 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 VITQ6UXI7 678 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 RNF19BQ6ZMZ0 732 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 ZNF687Q8N1G0 1237 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 NELL1Q92832 810 aa16.83■□□□□ 0.28
RAB5C-205ENST00000550013 TRMT61BQ9BVS5 477 aaKnown RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 AFF4Q9UHB7 1163 aaKnown RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 SMG5Q9UPR3 1016 aaKnown RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 MRPS17Q9Y2R5 130 aaKnown RBP16.83■□□□□ 0.28
RAB5C-205ENST00000550013 NCANO14594 1321 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 LILRB5O75023 590 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 TOM1L1O75674 476 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 MICAL2O94851 1124 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 CXCL8P10145 99 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 MYL4P12829 197 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 CPB1P15086 417 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 GUCY2CP25092 1073 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 GDI1P31150 447 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 VIPR2P41587 438 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 SPAG1Q07617 926 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 STRN3Q13033 797 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 MAP4K3Q8IVH8 894 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 TMEM161BQ8NDZ6 487 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 APPL2Q8NEU8 664 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 SMARCD2Q92925 531 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 ZSCAN31Q96LW9 406 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-205ENST00000550013 ZNF512Q96ME7 567 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-205ENST00000550013 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 EPC1Q9H2F5 836 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 C17orf75Q9HAS0 396 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 PCDHB8Q9UN66 801 aa16.82■□□□□ 0.28
RAB5C-205ENST00000550013 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 VNN2O95498 520 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 PLS3P13797 630 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 PRPHP41219 470 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 IQCEQ6IPM2 695 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 DTHD1Q6ZMT9 781 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 BORCS6Q96GS4 357 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 PLIN2Q99541 437 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 ZNF334Q9HCZ1 680 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 SH2B1Q9NRF2 756 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 YIPF1Q9Y548 306 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 TIMM13Q9Y5L4 95 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-205ENST00000550013 ANK1P16157 1881 aa16.81■□□□□ 0.28
RAB5C-205ENST00000550013 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
RAB5C-205ENST00000550013 LAD1O00515 517 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms