RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RHOT1Q8IXI2 618 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 PIK3C3Q8NEB9 887 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 FAM167AQ96KS9 214 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 SGCZQ96LD1 299 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 CCDC138Q96M89 665 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 TBCBQ99426 244 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 MANSC1Q9H8J5 431 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 AURKAIP1Q9NWT8 199 aaPredicted RBP5.17□□□□□ -1.58
SNRPF-202ENST00000549580 CALCOCO1Q9P1Z2 691 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 DMTF1Q9Y222 760 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 VWA7Q9Y334 891 aa5.17□□□□□ -1.58
SNRPF-202ENST00000549580 CFAP69A5D8W1 941 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 LRRC14BA6NHZ5 514 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 RASA4BC9J798 803 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 RASA4O43374 803 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 MGEA5O60502 916 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 TCEA3O75764 348 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 ARIH2O95376 493 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 NUDT3O95989 172 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 FOSP01100 380 aaPredicted RBP5.16□□□□□ -1.58
SNRPF-202ENST00000549580 RPL17P18621 184 aaKnown RBP5.16□□□□□ -1.58
SNRPF-202ENST00000549580 SCNN1GP51170 649 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 SESN2P58004 480 aaPredicted RBP5.16□□□□□ -1.58
SNRPF-202ENST00000549580 FGL2Q14314 439 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 RAB39AQ14964 217 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 INO80DQ53TQ3 878 aaPredicted RBP5.16□□□□□ -1.58
SNRPF-202ENST00000549580 Q6ZRM9 215 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 OTOP2Q7RTS6 562 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 CLEC14AQ86T13 490 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 VRK3Q8IV63 474 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 DEPTORQ8TB45 409 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 ANKS1AQ92625 1134 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 PHKBQ93100 1093 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 CYFIP2Q96F07 1278 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 APIPQ96GX9 242 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 CLPTM1LQ96KA5 538 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 APOL5Q9BWW9 433 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 BCO1Q9HAY6 547 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 TDP1Q9NUW8 608 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
SNRPF-202ENST00000549580 TYRP14679 529 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 ECHS1P30084 290 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 ADSLP30566 484 aaPredicted RBP5.15□□□□□ -1.59
SNRPF-202ENST00000549580 SREBF1P36956 1147 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 PRIM2P49643 509 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 CASP5P51878 434 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 WNT3AP56704 352 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 C21orf58P58505 322 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 HGFACQ04756 655 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 C1orf228Q6PIY5 440 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 HEATR3Q7Z4Q2 680 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 MSL3Q8N5Y2 521 aaKnown RBP5.15□□□□□ -1.59
SNRPF-202ENST00000549580 SHCBP1Q8NEM2 672 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 OR7D4Q8NG98 312 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 IFI44Q8TCB0 444 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 ZNF480Q8WV37 535 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 GFM2Q969S9 779 aaKnown RBP5.15□□□□□ -1.59
SNRPF-202ENST00000549580 EVI5LQ96CN4 794 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 NT5C1BQ96P26 610 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 SELENOOQ9BVL4 669 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 NRDE2Q9H7Z3 1164 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
SNRPF-202ENST00000549580 LMBRD1Q9NUN5 540 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 TRPS1Q9UHF7 1281 aa5.15□□□□□ -1.59
SNRPF-202ENST00000549580 MYO1FO00160 1098 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 FOXN3O00409 490 aaPredicted RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PHGDHO43175 533 aaKnown RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PRAMEF4O60810 478 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 GASTP01350 101 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 AMY1AP04745 511 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 TRAPPC10P48553 1259 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 STAT5BP51692 787 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 ATP8B2P98198 1209 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 TLE1Q04724 770 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 CHAF1AQ13111 956 aaPredicted RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PLS1Q14651 629 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 KHDC1Q4VXA5 237 aaKnown RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 DGKKQ5KSL6 1271 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 ADGRE4PQ86SQ3 457 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 LILRA3Q8N6C8 439 aaPredicted RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 ACRBPQ8NEB7 543 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 IL31RAQ8NI17 732 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 MTFMTQ96DP5 389 aaKnown RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 SLC35A4Q96G79 324 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 RIPOR3Q96MK2 946 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PDCD2LQ9BRP1 358 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 LRRC27Q9C0I9 530 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 OR10A2Q9H208 303 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 NELFAQ9H3P2 528 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 ARMT1Q9H993 441 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PPCSQ9HAB8 311 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 TRMT13Q9NUP7 481 aaKnown RBP5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PNPOQ9NVS9 261 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 FAM184BQ9ULE4 1060 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 TPCN1Q9ULQ1 816 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 PCDHA3Q9Y5H8 950 aa5.14□□□□□ -1.59
SNRPF-202ENST00000549580 TMEM191CA6NGB0 347 aa5.13□□□□□ -1.59
SNRPF-202ENST00000549580 RHPN2P1A8MT19 583 aa5.13□□□□□ -1.59
SNRPF-202ENST00000549580 ISM1B1AKI9 464 aa5.13□□□□□ -1.59
SNRPF-202ENST00000549580 NT5C1B-RDH14C9J2C7 533 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms