RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 ASTE1Q2TB18 679 aaPredicted RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 ARHGAP29Q52LW3 1261 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 ZNF667Q5HYK9 610 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 DNTTIP2Q5QJE6 756 aaKnown RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 ZNF662Q6ZS27 426 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 NECAB2Q7Z6G3 386 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 TTC39CQ8N584 583 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 TATDN2Q93075 761 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 FAM84AQ96KN4 292 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 KREMEN1Q96MU8 473 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 ADAM2Q99965 735 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 PI4K2AQ9BTU6 479 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNF41-206ENST00000549038 APOL6Q9BWW8 343 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 GPR88Q9GZN0 384 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 NIF3L1Q9GZT8 377 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 NXF3Q9H4D5 531 aaKnown RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 FAM124BQ9H5Z6 455 aaPredicted RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 DPP3Q9NY33 737 aa11.22□□□□□ -0.61
RNF41-206ENST00000549038 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
RNF41-206ENST00000549038 CENPFP49454 3210 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 KRT86O43790 486 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 PARNO95453 639 aaKnown RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 CST3P01034 146 aaPredicted RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 PLEKP08567 350 aaPredicted RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 ITGA4P13612 1032 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 KRT5P13647 590 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 ATF7P17544 494 aaPredicted RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 CYP3A5P20815 502 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 TNFAIP3P21580 790 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 MAGEA1P43355 309 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 PDE6CP51160 858 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 VAV2P52735 878 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 MYL6P60660 151 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 ZNF571Q7Z3V5 609 aaPredicted RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 ZNF677Q86XU0 584 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 C1orf127Q8N9H9 656 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 PGBD4Q96DM1 585 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 FTHL17Q9BXU8 183 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 IFIH1Q9BYX4 1025 aaKnown RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 HIPK3Q9H422 1215 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 CYP3A43Q9HB55 503 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 APOBEC3GQ9HC16 384 aaKnown RBP11.21□□□□□ -0.61
RNF41-206ENST00000549038 TMEM39AQ9NV64 488 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 NUB1Q9Y5A7 615 aa11.21□□□□□ -0.61
RNF41-206ENST00000549038 ATP8B3O60423 1300 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 SMIM28A0A1B0GU29 152 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 KIF5CO60282 957 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 MGEA5O60502 916 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 NBNO60934 754 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 ITGB3P05106 788 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 TNNT1P13805 278 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 POLR2BP30876 1174 aaKnown RBP11.2□□□□□ -0.62
RNF41-206ENST00000549038 PNPLA4P41247 253 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 GPNMBQ14956 572 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 ZBTB6Q15916 424 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 LRRC52Q8N7C0 313 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 SEPT8Q92599 483 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 KAT5Q92993 513 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 HPDLQ96IR7 371 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
RNF41-206ENST00000549038 RPS6KC1Q96S38 1066 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 AGPAT1Q99943 283 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 XYLT2Q9H1B5 865 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNF41-206ENST00000549038 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 PCDHB4Q9Y5E5 795 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 PCDHA13Q9Y5I0 950 aa11.2□□□□□ -0.62
RNF41-206ENST00000549038 FRMPD3Q5JV73 1810 aa11.19□□□□□ -0.62
RNF41-206ENST00000549038 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
RNF41-206ENST00000549038 BRCA2P51587 3418 aa11.19□□□□□ -0.62
RNF41-206ENST00000549038 CYP26A1O43174 497 aa11.19□□□□□ -0.62
RNF41-206ENST00000549038 CLTBP09497 229 aa11.19□□□□□ -0.62
RNF41-206ENST00000549038 PNMA6AP0CW24 399 aaPredicted RBP11.19□□□□□ -0.62
RNF41-206ENST00000549038 TNNC1P63316 161 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms