RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 C11orf54Q9H0W9 315 aaPredicted RBP5.49□□□□□ -1.53
CCDC38-206ENST00000548771 KCTD5Q9NXV2 234 aa5.49□□□□□ -1.53
CCDC38-206ENST00000548771 SLC5A4Q9NY91 659 aa5.49□□□□□ -1.53
CCDC38-206ENST00000548771 TESQ9UGI8 421 aaKnown RBP5.49□□□□□ -1.53
CCDC38-206ENST00000548771 IPPQ9Y573 584 aa5.49□□□□□ -1.53
CCDC38-206ENST00000548771 CDHR4A6H8M9 788 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
CCDC38-206ENST00000548771 FZD9O00144 591 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA12O60330 932 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 IGLV2-14P01704 120 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 SBK3P0C264 359 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 FCER1AP12319 257 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 EDNRBP24530 442 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 FOXR2Q6PJQ5 311 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 TMPRSS9Q7Z410 1059 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 BOLLQ8N9W6 283 aaKnown RBP5.48□□□□□ -1.53
CCDC38-206ENST00000548771 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC38-206ENST00000548771 IL17RDQ8NFM7 739 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 NLGN4YQ8NFZ3 816 aaPredicted RBP5.48□□□□□ -1.53
CCDC38-206ENST00000548771 MRGPRX4Q96LA9 322 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 AIFM2Q9BRQ8 373 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 CASS4Q9NQ75 786 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 TLK1Q9UKI8 766 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA9Q9Y5G4 932 aaKnown RBP5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA8Q9Y5G5 932 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA7Q9Y5G6 932 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA6Q9Y5G7 932 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHGA3Q9Y5H0 932 aa5.48□□□□□ -1.53
CCDC38-206ENST00000548771 A0A1W2PS29 197 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 SGTAO43765 313 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 NDUFS2O75306 463 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 MATN4O95460 622 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 C5AR1P21730 350 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 CACNA2D1P54289 1103 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 KRT85P78386 507 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 CDC42EP1Q00587 391 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 GEN1Q17RS7 908 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 RHOT1Q8IXI2 618 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 COLGALT2Q8IYK4 626 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 PPM1NQ8N819 430 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 TBC1D15Q8TC07 691 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 PTCD3Q96EY7 689 aaKnown RBP5.47□□□□□ -1.53
CCDC38-206ENST00000548771 FAXDC2Q96IV6 333 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 DUSP26Q9BV47 211 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 CTTNBP2NLQ9P2B4 639 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 MTO1Q9Y2Z2 717 aaKnown RBP5.47□□□□□ -1.53
CCDC38-206ENST00000548771 PCDHA13Q9Y5I0 950 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 SPATA31A6Q5VVP1 1343 aa5.47□□□□□ -1.53
CCDC38-206ENST00000548771 KIAA0391O15091 583 aaKnown RBP5.46□□□□□ -1.54
CCDC38-206ENST00000548771 PROM1O43490 865 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 HAUS5O94927 633 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 SRGNP10124 158 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 IARSP41252 1262 aaKnown RBP5.46□□□□□ -1.54
CCDC38-206ENST00000548771 FLYWCH1Q4VC44 716 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 PABPC1LQ4VXU2 614 aaKnown RBP5.46□□□□□ -1.54
CCDC38-206ENST00000548771 SSH3Q8TE77 659 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 NELL1Q92832 810 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 ADARB2Q9NS39 739 aaKnown RBP5.46□□□□□ -1.54
CCDC38-206ENST00000548771 MCM8Q9UJA3 840 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 LIMCH1Q9UPQ0 1083 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 ATP8A1Q9Y2Q0 1164 aa5.46□□□□□ -1.54
CCDC38-206ENST00000548771 GRM6O15303 877 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 HTRA2O43464 458 aaPredicted RBP5.45□□□□□ -1.54
CCDC38-206ENST00000548771 SLC43A1O75387 559 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 FOLR3P41439 243 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 VWA1Q6PCB0 445 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 PGM2L1Q6PCE3 622 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 AMOTL1Q8IY63 956 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 LRIG1Q96JA1 1093 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 TLR10Q9BXR5 811 aa5.45□□□□□ -1.54
CCDC38-206ENST00000548771 PRAMEF33A0A0G2JMD5 474 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 INO80B-WBP1J3KQ70 363 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 PRAMEF10O60809 474 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 PROP1O75360 226 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 RBMXL2O75526 392 aaKnown RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 AGFG2O95081 481 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 GATA3P23771 443 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 ZNF280AP59817 542 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 MRPS35P82673 323 aaKnown RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 CREMQ03060 361 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 ATP2B3Q16720 1220 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 UTP14CQ5TAP6 766 aaKnown RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 ANKS1AQ92625 1134 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 COA7Q96BR5 231 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 KLHL32Q96NJ5 620 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 INO80BQ9C086 356 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 TDP1Q9NUW8 608 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 JKAMPQ9P055 326 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 LRIT1Q9P2V4 623 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 DMTF1Q9Y222 760 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 PCDHB1Q9Y5F3 818 aa5.44□□□□□ -1.54
CCDC38-206ENST00000548771 COL3A1P02461 1466 aaPredicted RBP5.44□□□□□ -1.54
CCDC38-206ENST00000548771 LRRC3CA6NJW4 275 aa5.43□□□□□ -1.54
CCDC38-206ENST00000548771 MPPED1O15442 326 aa5.43□□□□□ -1.54
CCDC38-206ENST00000548771 ERBB2P04626 1255 aa5.43□□□□□ -1.54
CCDC38-206ENST00000548771 MTHFD1P11586 935 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms