RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 TMEM270Q6UE05 265 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 DNAAF5Q86Y56 855 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 RBBP8NLQ8NC74 664 aaPredicted RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 ZNF296Q8WUU4 475 aaPredicted RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 RFFLQ8WZ73 363 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 DDX1Q92499 740 aaKnown RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 KIF12Q96FN5 646 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 FAXDC2Q96IV6 333 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 PCDHB18PQ96TA0 734 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 EIF2AQ9BY44 585 aaKnown RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 XYLT2Q9H1B5 865 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 ISCUQ9H1K1 167 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 ACP6Q9NPH0 428 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 DPP3Q9NY33 737 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 TAS2R14Q9NYV8 317 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 ITGA11Q9UKX5 1188 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 CNTN6Q9UQ52 1028 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 PCDHGC5Q9Y5F6 944 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 CDY2AQ9Y6F7 541 aa8.37□□□□□ -1.07
TMEM106C-208ENST00000548355 KAT6AQ92794 2004 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CTSHP09668 335 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 PRLRP16471 622 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 TCP1P17987 556 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CD58P19256 250 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 GNA15P30679 374 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 POLR2BP30876 1174 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 GRK4P32298 578 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 THPOP40225 353 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 ACLYP53396 1101 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 GPC5P78333 572 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 PTPN11Q06124 597 aaPredicted RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CKAP4Q07065 602 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 ITGA7Q13683 1181 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CLEC16AQ2KHT3 1053 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 TWF2Q6IBS0 349 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 ACAD10Q6JQN1 1059 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 SCARA5Q6ZMJ2 495 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 TRIM72Q6ZMU5 477 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 RPAINQ86UA6 219 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 FAM228AQ86W67 206 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 PALB2Q86YC2 1186 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 RHOT2Q8IXI1 618 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 SYCE1Q8N0S2 351 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 UBR7Q8N806 425 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 BEST2Q8NFU1 509 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 HPDLQ96IR7 371 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 SNX27Q96L92 541 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 TSPAN18Q96SJ8 248 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 APOL6Q9BWW8 343 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 THAP2Q9H0W7 228 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 NXF3Q9H4D5 531 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 CISHQ9NSE2 258 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 PARP2Q9UGN5 583 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 SNX12Q9UMY4 172 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 AGAP1Q9UPQ3 857 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 NOC2LQ9Y3T9 749 aaKnown RBP8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 HYOU1Q9Y4L1 999 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 THSD7BQ9C0I4 1608 aa8.36□□□□□ -1.07
TMEM106C-208ENST00000548355 GRIN2DO15399 1336 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 FAM170AA1A519 330 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 GRID2IPA4D2P6 1211 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 GPR182O15218 404 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TLR3O15455 904 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 THAP12O43422 761 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 XPOTO43592 962 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 NCK2O43639 380 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 SRGAP2O75044 1071 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TADA3O75528 432 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 RECQL4O94761 1208 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 STAU1O95793 577 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 FTCDO95954 541 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CALCAP01258 141 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 WEE2P0C1S8 567 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 AKAP5P24588 427 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 ASPAP45381 313 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 ZNF132P52740 706 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TNNC1P63316 161 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 PTK7Q13308 1070 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 WDR72Q3MJ13 1102 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 UBXN11Q5T124 520 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 PPP1R2P3Q6NXS1 205 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 HACE1Q8IYU2 909 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms