RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 ATF7P17544 494 aaPredicted RBP13.27□□□□□ -0.29
RAB5B-204ENST00000548068 CAPN2P17655 700 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 ARHGAP25P42331 645 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 GNG11P61952 73 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 ALKBH5Q6P6C2 394 aaKnown RBP13.27□□□□□ -0.29
RAB5B-204ENST00000548068 ALKAL1Q6UXT8 129 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 EPS8L1Q8TE68 723 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 SYT11Q9BT88 431 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 TRAIPQ9BWF2 469 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 APOL6Q9BWW8 343 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 APOBEC3GQ9HC16 384 aaKnown RBP13.27□□□□□ -0.29
RAB5B-204ENST00000548068 FAM105AQ9NUU6 356 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 SIX4Q9UIU6 781 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 NAGPAQ9UK23 515 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 PADI3Q9ULW8 664 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 NUB1Q9Y5A7 615 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 PCDHB2Q9Y5E7 798 aa13.27□□□□□ -0.29
RAB5B-204ENST00000548068 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CYP26A1O43174 497 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CST3P01034 146 aaPredicted RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 GHRP10912 638 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 ITGA4P13612 1032 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CYP3A5P20815 502 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 POLR2BP30876 1174 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CD52P31358 61 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CDK7P50613 346 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 LPIN1Q14693 890 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 MTFR1Q15390 333 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 IFI16Q16666 785 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 PPP1R2P3Q6NXS1 205 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 GLYCTKQ8IVS8 523 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 LRRC52Q8N7C0 313 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 SMG8Q8ND04 991 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF592Q92610 1267 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF560Q96MR9 790 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CYP3A43Q9HB55 503 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 SEPT11Q9NVA2 429 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 SLC38A7Q9NVC3 462 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 NOCTQ9UK39 431 aaKnown RBP13.26□□□□□ -0.29
RAB5B-204ENST00000548068 GUCA1BQ9UMX6 200 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
RAB5B-204ENST00000548068 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 DDX3XO00571 662 aaKnown RBP eCLIP13.25□□□□□ -0.299e-12■■■■□ 20.3
RAB5B-204ENST00000548068 TACC1O75410 805 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 SGPL1O95470 568 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 CYP11B1P15538 503 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 SELPP16109 830 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 ACO1P21399 889 aaKnown RBP13.25□□□□□ -0.29
RAB5B-204ENST00000548068 CASQ1P31415 396 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 PNPLA4P41247 253 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 TNNC1P63316 161 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 CDR2Q01850 454 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 ZBTB6Q15916 424 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 SYT10Q6XYQ8 523 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
RAB5B-204ENST00000548068 RNF10Q8N5U6 811 aaKnown RBP13.25□□□□□ -0.29
RAB5B-204ENST00000548068 DNAJC5GQ8N7S2 189 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 UBR7Q8N806 425 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
RAB5B-204ENST00000548068 SLC30A5Q8TAD4 765 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 RPS6KC1Q96S38 1066 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 ARID3AQ99856 593 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 NENFQ9UMX5 172 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 GIT1Q9Y2X7 761 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 HES2Q9Y543 173 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
RAB5B-204ENST00000548068 UMODL1Q5DID0 1318 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 SMIM28A0A1B0GU29 152 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF623O75123 536 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 HSPA8P11142 646 aaKnown RBP13.24□□□□□ -0.29
RAB5B-204ENST00000548068 GZMAP12544 262 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 AKAP5P24588 427 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 ASPAP45381 313 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 DSC3Q14574 896 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 WDR72Q3MJ13 1102 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 ZNF569Q5MCW4 686 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 TMEM270Q6UE05 265 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 LRRC8DQ7L1W4 858 aa13.24□□□□□ -0.29
RAB5B-204ENST00000548068 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms