RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ARHGEF19Q8IW93 802 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 ZBTB8OSQ8IWT0 167 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 GPD1LQ8N335 351 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 MMGT1Q8N4V1 131 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 LINC01465Q8N7H1 131 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 HAPLN2Q9GZV7 340 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 CCDC113Q9H0I3 377 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 REV3LO60673 3130 aa17.79■□□□□ 0.44
CHMP1A-204ENST00000547687 ASAP2O43150 1006 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 LRRN2O75325 713 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 TNFAIP3P21580 790 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 MCM3P25205 808 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 TFDP1Q14186 410 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 SPATA4Q8NEY3 305 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 OLIG1Q8TAK6 271 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 PARD3BQ8TEW8 1205 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 CCDC127Q96BQ5 260 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 FAM213AQ9BRX8 229 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 SYT11Q9BT88 431 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 RNF14Q9UBS8 474 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
CHMP1A-204ENST00000547687 C17orf102A2RUQ5 167 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 FGBP02675 491 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 CCDC70Q6NSX1 233 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 PSRC1Q6PGN9 363 aaPredicted RBP17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 TMC2Q8TDI7 906 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 MFSD14AQ96MC6 490 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 C2orf40Q9H1Z8 148 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 ANKFY1Q9P2R3 1169 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 AKT3Q9Y243 479 aa17.77■□□□□ 0.44
CHMP1A-204ENST00000547687 A0A0A6YYK5 440 aaPredicted RBP17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 ZBBXA8MT70 800 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 PITPNM1O00562 1244 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 PRKCBP05771 671 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 CKBP12277 381 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 PBX2P40425 430 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 GALCP54803 685 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 BFSP2Q13515 415 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 MAPK6Q16659 721 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 CFAP221Q4G0U5 840 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 SLFN12LQ6IEE8 588 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 AGO2Q9UKV8 859 aaKnown RBP17.77■□□□□ 0.43
CHMP1A-204ENST00000547687 LRRIQ3A6PVS8 624 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 INO80B-WBP1J3KQ70 363 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 EXTL3O43909 919 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 VTNP04004 478 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 TMOD1P28289 359 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MATR3P43243 847 aaKnown RBP eCLIP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 PTENP60484 403 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 CYP24A1Q07973 514 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 GPNMBQ14956 572 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 ZNF618Q5T7W0 954 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 KRT39Q6A163 491 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 ZPBP2Q6X784 338 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 HDXQ7Z353 690 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 TPCN2Q8NHX9 752 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 LMBR1Q8WVP7 490 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MS4A14Q96JA4 679 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 POP1Q99575 1024 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MRPL4Q9BYD3 311 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MINDY3Q9H8M7 445 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 TMEM8AQ9HCN3 771 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 SMARCAL1Q9NZC9 954 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 L1RE1Q9UN81 338 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 PACSIN2Q9UNF0 486 aaPredicted RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 VCANP13611 3396 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 A0A0B4J269 797 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 ZNF233A6NK53 670 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MAP2K7O14733 419 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 ACOT2P49753 483 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 DNA2P51530 1060 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 NLRP11P59045 1033 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 RPS6KA1Q15418 735 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 TRIM71Q2Q1W2 868 aaKnown RBP17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 LRRC8DQ7L1W4 858 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 USP37Q86T82 979 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 LRRC57Q8N9N7 239 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 AGPAT1Q99943 283 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 MSTO1Q9BUK6 570 aa17.76■□□□□ 0.43
CHMP1A-204ENST00000547687 A0A087WZ62 844 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 TMCO5BA8MYB1 307 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 GTF2H1P32780 548 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 THPOP40225 353 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 PTK7Q13308 1070 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 TCTN1Q2MV58 587 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 RASIP1Q5U651 963 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 CRELD2Q6UXH1 353 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 RPUSD2Q8IZ73 545 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 HERVK_113Q902F9 699 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 TAF4BQ92750 862 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 SEMA4DQ92854 862 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 ACO2Q99798 780 aaKnown RBP17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 FDXACB1Q9BRP7 624 aaPredicted RBP17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 OSBPL7Q9BZF2 842 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 FZD8Q9H461 694 aa17.75■□□□□ 0.43
CHMP1A-204ENST00000547687 KIAA1586Q9HCI6 787 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms