RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 NOTCH4Q99466 2003 aa25.19■■□□□ 1.62
SMARCD1-204ENST00000547637 PP2D1A8MPX8 630 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 MAN2B1O00754 1011 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 XPOTO43592 962 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 SLC5A9Q2M3M2 681 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 DDX12PQ92771 950 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 SECISBP2LQ93073 1101 aaKnown RBP25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 BICD1Q96G01 975 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 TBC1D32Q96NH3 1257 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 BRD9Q9H8M2 597 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 GVINP1Q7Z2Y8 2422 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 MYH11P35749 1972 aa25.18■■□□□ 1.62
SMARCD1-204ENST00000547637 SPTLC1O15269 473 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 TBC1D4O60343 1298 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 LRRN2O75325 713 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 CPB1P15086 417 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 CSTF1Q05048 431 aaKnown RBP25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 ADCY1Q08828 1119 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 MAPK7Q13164 816 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 TANGO2Q6ICL3 276 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 KIAA2013Q8IYS2 634 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 SYT2Q8N9I0 419 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 IRF7Q92985 503 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 C18orf25Q96B23 403 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 ZBTB45Q96K62 511 aaPredicted RBP25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 TRMT61BQ9BVS5 477 aaKnown RBP25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 PCDHB8Q9UN66 801 aa25.17■■□□□ 1.62
SMARCD1-204ENST00000547637 CLTAP09496 248 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 CEBPBP17676 345 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 CD72P21854 359 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 SCP2P22307 547 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 RPS9P46781 194 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 RAD51AP2Q09MP3 1159 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 SLC10A6Q3KNW5 377 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 HYIQ5T013 277 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 USP37Q86T82 979 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 TMEM161BQ8NDZ6 487 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 MMTAG2Q9BU76 263 aaKnown RBP25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 GPR88Q9GZN0 384 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 ASAH2Q9NR71 780 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 MTF2Q9Y483 593 aaPredicted RBP25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 PCDHGA2Q9Y5H1 932 aa25.16■■□□□ 1.62
SMARCD1-204ENST00000547637 FANCMQ8IYD8 2048 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 H3BQV1 296 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 ABLIM1O14639 778 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 ATP2C1P98194 919 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 YWHAHQ04917 246 aaPredicted RBP25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 PPP2R5DQ14738 602 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 IL17AQ16552 155 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 PRSS36Q5K4E3 855 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 ARL6IP4Q66PJ3 421 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 KCNK18Q7Z418 384 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 CLDN23Q96B33 292 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 TSPAN18Q96SJ8 248 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 HEBP1Q9NRV9 189 aa25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 UBQLN1Q9UMX0 589 aaKnown RBP25.15■■□□□ 1.62
SMARCD1-204ENST00000547637 SEC24AO95486 1093 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 MAPTP10636 758 aaKnown RBP25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 PPP2R3AQ06190 1150 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 MCL1Q07820 350 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 TWF1Q12792 350 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 PLD1Q13393 1074 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 GPR161Q8N6U8 529 aaKnown RBP25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 SMARCD2Q92925 531 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 KIF12Q96FN5 646 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 PLA2G2FQ9BZM2 168 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 ZSCAN32Q9NX65 697 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 NCDNQ9UBB6 729 aa25.14■■□□□ 1.62
SMARCD1-204ENST00000547637 VWA3AA6NCI4 1184 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 SLC26A4O43511 780 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 PLA2G4BP0C869 781 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 PSMC3P17980 439 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 CYP3A5P20815 502 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 LIG4P49917 911 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 FAM78AQ5JUQ0 283 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 DSTYKQ6XUX3 929 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 MAML2Q8IZL2 1156 aaPredicted RBP25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 DEPDC1BQ8WUY9 529 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 E2F7Q96AV8 911 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 CALML4Q96GE6 196 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 ASB16Q96NS5 453 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 PLIN2Q99541 437 aa25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 FAM126AQ9BYI3 521 aaPredicted RBP25.13■■□□□ 1.61
SMARCD1-204ENST00000547637 CXCL8P10145 99 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 MYL4P12829 197 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 TARSP26639 723 aaKnown RBP25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 LRPAP1P30533 357 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 ABCD1P33897 745 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 PUM1Q14671 1186 aaKnown RBP eCLIP25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 RABEP1Q15276 862 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 SEZ6Q53EL9 994 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 TCEAL4Q96EI5 215 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 AK8Q96MA6 479 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 IER2Q9BTL4 223 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 SLITRK6Q9H5Y7 841 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 TRPV5Q9NQA5 729 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 ODF2LQ9ULJ1 636 aa25.12■■□□□ 1.61
SMARCD1-204ENST00000547637 VPS13AQ96RL7 3174 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 M0QZQ0 153 aa25.11■■□□□ 1.61
SMARCD1-204ENST00000547637 OAZ2O95190 189 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms