RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MKNK1Q9BUB5 465 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 RXFP1Q9HBX9 757 aa18.17■□□□□ 0.5
CCDC38-203ENST00000546803 COL4A4P53420 1690 aaPredicted RBP18.17■□□□□ 0.5
CCDC38-203ENST00000546803 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 BICDL2A1A5D9 508 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 ARHGEF37A1IGU5 675 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 AKAP3O75969 853 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 TNNI1P19237 187 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 PTMSP20962 102 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 PNPLA4P41247 253 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 NRIP1P48552 1158 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 AP3M2P53677 418 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 LILRA4P59901 499 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 RBP5P82980 135 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 INTS8Q75QN2 995 aaKnown RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 RBM23Q86U06 439 aaKnown RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 ZC3H3Q8IXZ2 948 aaKnown RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 EFHBQ8N7U6 833 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 C1orf127Q8N9H9 656 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 MLKLQ8NB16 471 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 AUTS2Q8WXX7 1259 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 PIK3R5Q8WYR1 880 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 PABPC5Q96DU9 382 aaKnown RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 ZNF560Q96MR9 790 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 MTMR12Q9C0I1 747 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 FNIP2Q9P278 1114 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 R3HCC1Q9Y3T6 440 aaKnown RBP18.16■□□□□ 0.5
CCDC38-203ENST00000546803 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
CCDC38-203ENST00000546803 C2CD2LO14523 706 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 KRT13P13646 458 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 TAF6P49848 677 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 PMS1P54277 932 aaKnown RBP18.15■□□□□ 0.5
CCDC38-203ENST00000546803 CLDN10P78369 228 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 PAK1Q13153 545 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 CTC1Q2NKJ3 1217 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 KLHL10Q6JEL2 608 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 ANKS3Q6ZW76 656 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 PPFIBP1Q86W92 1011 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 FAM186BQ8IYM0 893 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 TMEM130Q8N3G9 435 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 CSGALNACT2Q8N6G5 542 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 LRRC52Q8N7C0 313 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 APPL2Q8NEU8 664 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 OR5B17Q8NGF7 314 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 NELFBQ8WX92 580 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 B3GALT6Q96L58 329 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 KLHL5Q96PQ7 755 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 IGFLR1Q9H665 355 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 PCDHB8Q9UN66 801 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 COG5Q9UP83 839 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 AGAP1Q9UPQ3 857 aa18.15■□□□□ 0.5
CCDC38-203ENST00000546803 I3L4J1 428 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 M0QZQ0 153 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 PPEF2O14830 753 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 IKBKBO14920 756 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 PER2O15055 1255 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 CLASP2O75122 1294 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 C1RP00736 705 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 ITGB3P05106 788 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 ADH1AP07327 375 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 CNPP09543 421 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 EPB41P11171 864 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 POLR2BP30876 1174 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 ADAM15Q13444 863 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 SV2CQ496J9 727 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 LMBRD2Q68DH5 695 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 TTI2Q6NXR4 508 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 DSTYKQ6XUX3 929 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 RBM43Q6ZSC3 357 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 TRAPPC11Q7Z392 1133 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 LNX1Q8TBB1 728 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 HLA-CQ95604 372 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 CEP63Q96MT8 703 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
CCDC38-203ENST00000546803 PTPRJQ12913 1337 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 SZT2Q5T011 3432 aa18.14■□□□□ 0.49
CCDC38-203ENST00000546803 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
CCDC38-203ENST00000546803 TRIM49BA6NDI0 452 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 SLC16A3O15427 465 aaKnown RBP18.13■□□□□ 0.49
CCDC38-203ENST00000546803 KRT19P08727 400 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 KLRC2P26717 231 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 TKTP29401 623 aaKnown RBP18.13■□□□□ 0.49
CCDC38-203ENST00000546803 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
CCDC38-203ENST00000546803 VAMP7P51809 220 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 NLRP12P59046 1061 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 MCCD1P59942 119 aaPredicted RBP18.13■□□□□ 0.49
CCDC38-203ENST00000546803 PSMD5Q16401 504 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 TMEM184AQ6ZMB5 413 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 CXorf38Q8TB03 319 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 PLEKHO2Q8TD55 490 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 DACH1Q9UI36 760 aa18.13■□□□□ 0.49
CCDC38-203ENST00000546803 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms