RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 DDX42Q86XP3 938 aaKnown RBP eCLIP7.48□□□□□ -1.21
AC078880.1-201ENST00000546696 PDLIM2Q96JY6 352 aa7.48□□□□□ -1.21
AC078880.1-201ENST00000546696 LRFN3Q9BTN0 628 aa7.48□□□□□ -1.21
AC078880.1-201ENST00000546696 KIAA1586Q9HCI6 787 aa7.48□□□□□ -1.21
AC078880.1-201ENST00000546696 TDP1Q9NUW8 608 aa7.48□□□□□ -1.21
AC078880.1-201ENST00000546696 NDUFS2O75306 463 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 ZFPL1O95159 310 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 FCER1AP12319 257 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 CDC42EP1Q00587 391 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 COLEC12Q5KU26 742 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 ZNF362Q5T0B9 420 aaPredicted RBP7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 RSPH3Q86UC2 560 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 DCBLD1Q8N8Z6 715 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 Q8NA96 180 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 ACTRT2Q8TDY3 377 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 MKS1Q9NXB0 559 aa7.47□□□□□ -1.21
AC078880.1-201ENST00000546696 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 MTHFD1P11586 935 aaKnown RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 ZNF37AP17032 561 aaPredicted RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 SLC6A4P31645 630 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 CACNA2D1P54289 1103 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 TARDBPQ13148 414 aaKnown RBP eCLIP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 HNRNPA0Q13151 305 aaKnown RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 CBARPQ8N350 705 aaPredicted RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 SSH3Q8TE77 659 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 JADE3Q92613 823 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 HDAC10Q969S8 669 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 TMX3Q96JJ7 454 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 SPATA5L1Q9BVQ7 753 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 TUBD1Q9UJT1 453 aa7.46□□□□□ -1.22
AC078880.1-201ENST00000546696 A0A1W2PS29 197 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 MGST3O14880 152 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 GRM6O15303 877 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 C1RP00736 705 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 IGLV2-14P01704 120 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 IARSP41252 1262 aaKnown RBP7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 SLC16A1P53985 500 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 PABPC1LQ4VXU2 614 aaKnown RBP7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 IFI44Q8TCB0 444 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 SPC25Q9HBM1 224 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 SEMA4GQ9NTN9 838 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 ATP8A1Q9Y2Q0 1164 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 PCDHA13Q9Y5I0 950 aa7.45□□□□□ -1.22
AC078880.1-201ENST00000546696 SGTAO43765 313 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 PEX1O43933 1283 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 ACAP2Q15057 778 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 IL17RDQ8NFM7 739 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 RAB24Q969Q5 203 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
AC078880.1-201ENST00000546696 AGFG2O95081 481 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 C5AR1P21730 350 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 FOLR3P41439 243 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 SF3B3Q15393 1217 aaKnown RBP7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 UTP14CQ5TAP6 766 aaKnown RBP7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 CLNKQ7Z7G1 428 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 TLR10Q9BXR5 811 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 SLC17A6Q9P2U8 582 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 NEU2Q9Y3R4 380 aa7.43□□□□□ -1.22
AC078880.1-201ENST00000546696 PRAMEF33A0A0G2JMD5 474 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 PRAMEF10O60809 474 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 SBK3P0C264 359 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 SRGNP10124 158 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 KCNA2P16389 499 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 NHLH1Q02575 133 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 RAB39AQ14964 217 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 SYDE2Q5VT97 1194 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 ZKSCAN2Q63HK3 967 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 KIAA0895LQ68EN5 471 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 INTS13Q9NVM9 706 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 JKAMPQ9P055 326 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 IPPQ9Y573 584 aa7.42□□□□□ -1.22
AC078880.1-201ENST00000546696 ARHGEF17Q96PE2 2063 aaPredicted RBP7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 YY2O15391 372 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 MT-CO1P00395 513 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 RPS7P62081 194 aaKnown RBP7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 ZNF844Q08AG5 666 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 VWA1Q6PCB0 445 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 ARHGEF25Q86VW2 580 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 TMEM125Q96AQ2 219 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 PACSIN1Q9BY11 444 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 LIMCH1Q9UPQ0 1083 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 CDYLQ9Y232 598 aa7.41□□□□□ -1.22
AC078880.1-201ENST00000546696 HTRA2O43464 458 aaPredicted RBP7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 SLC43A1O75387 559 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 C1QL1O75973 258 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 MATN4O95460 622 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 ZNF280AP59817 542 aaPredicted RBP7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 FPGSQ05932 587 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 PPP4R3AQ6IN85 833 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 MRGPRX4Q96LA9 322 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 CALCOCO1Q9P1Z2 691 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 CTTNBP2NLQ9P2B4 639 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 MRFAP1Q9Y605 127 aa7.4□□□□□ -1.22
AC078880.1-201ENST00000546696 CCDC151A5D8V7 595 aa7.39□□□□□ -1.23
AC078880.1-201ENST00000546696 MPPED1O15442 326 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms