RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 STK39Q9UEW8 545 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 SCN1AP35498 2009 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 SF3B1O75533 1304 aaKnown RBP eCLIP22.46■■□□□ 1.191e-6■■■■■ 69.2
SCARB1-211ENST00000546215 SOD2P04179 222 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 VAMP7P51809 220 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ENPEPQ07075 957 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 BFSP1Q12934 665 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 C1orf220Q5T0J3 134 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ZBP1Q9H171 429 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ANO10Q9NW15 660 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 SIX4Q9UIU6 781 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ITGA11Q9UKX5 1188 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ATG2AQ2TAZ0 1938 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 FSCN2O14926 492 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 CSPG5O95196 566 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 TNNC2P02585 160 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 ITGB3P05106 788 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 KRT13P13646 458 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 IGFBP4P22692 258 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 STX1AQ16623 288 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 TRAPPC11Q7Z392 1133 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 TCF25Q9BQ70 676 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 SRRTQ9BXP5 876 aaKnown RBP22.45■■□□□ 1.18
SCARB1-211ENST00000546215 CHST7Q9NS84 486 aa22.45■■□□□ 1.18
SCARB1-211ENST00000546215 PRUNE2Q8WUY3 3088 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 IKBKBO14920 756 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 LETM1O95202 739 aaPredicted RBP22.44■■□□□ 1.18
SCARB1-211ENST00000546215 CTSAP10619 480 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 BRCC3P46736 316 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 TYRO3Q06418 890 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 TMC7Q7Z402 723 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 USP37Q86T82 979 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 HERC2P3Q9BVR0 1158 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 NUB1Q9Y5A7 615 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 PCDHGC5Q9Y5F6 944 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 COL6A3P12111 3177 aa22.44■■□□□ 1.18
SCARB1-211ENST00000546215 TRAPPC3O43617 180 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 POLR2BP30876 1174 aaKnown RBP22.43■■□□□ 1.18
SCARB1-211ENST00000546215 AARSP49588 968 aaKnown RBP eCLIP22.43■■□□□ 1.184e-6■■■■■ 30.6
SCARB1-211ENST00000546215 AP3M2P53677 418 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 LILRA4P59901 499 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 ELAVL2Q12926 359 aaKnown RBP22.43■■□□□ 1.18
SCARB1-211ENST00000546215 TIGD5Q53EQ6 642 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 FAM171A1Q5VUB5 890 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 PDE12Q6L8Q7 609 aaKnown RBP22.43■■□□□ 1.18
SCARB1-211ENST00000546215 NGRNQ9NPE2 291 aaKnown RBP22.43■■□□□ 1.18
SCARB1-211ENST00000546215 ENTPD7Q9NQZ7 604 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 AGAP1Q9UPQ3 857 aa22.43■■□□□ 1.18
SCARB1-211ENST00000546215 I3L4J1 428 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 SPTLC1O15269 473 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 C4BPAP04003 597 aaKnown RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 TRIM49P0CI25 452 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 TRIM49CP0CI26 452 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 FOSL2P15408 326 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 USP41Q3LFD5 358 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 C11orf57Q6ZUT1 292 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 FRMD5Q7Z6J6 570 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 MICAL1Q8TDZ2 1067 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 SUSD3Q96L08 255 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 B3GALT6Q96L58 329 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 ARMCX3Q9UH62 379 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 VWA8A3KMH1 1905 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 LILRB3O75022 631 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 FGFR1OPO95684 399 aaKnown RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 CST3P01034 146 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 RBP5P82980 135 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 DSG1Q02413 1049 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 KIAA0319Q5VV43 1072 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 TDRD10Q5VZ19 366 aaKnown RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 PLPP4Q5VZY2 271 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 MRPL43Q8N983 215 aaKnown RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 AUTS2Q8WXX7 1259 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 METTL14Q9HCE5 456 aaKnown RBP22.42■■□□□ 1.18
SCARB1-211ENST00000546215 IRAK3Q9Y616 596 aa22.42■■□□□ 1.18
SCARB1-211ENST00000546215 SYCE3A1L190 88 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 HIDE1A8MVS5 230 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 CXCL14O95715 111 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 GNA14O95837 355 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 KRT19P08727 400 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 FGFR3P22607 806 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 PAX3P23760 479 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 TAF6P49848 677 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 PPP3CAQ08209 521 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 SMC1AQ14683 1233 aaKnown RBP22.41■■□□□ 1.18
SCARB1-211ENST00000546215 PTPN14Q15678 1187 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 ZACNQ401N2 412 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 RTP2Q5QGT7 225 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-211ENST00000546215 C15orf39Q6ZRI6 1047 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 SV2AQ7L0J3 742 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 LRRC52Q8N7C0 313 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 TTPALQ9BTX7 342 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 FUCA2Q9BTY2 467 aa22.41■■□□□ 1.18
SCARB1-211ENST00000546215 C2orf71A6NGG8 1288 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 M0QZQ0 153 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 PNPLA4P41247 253 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 GLUD2P49448 558 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 MARSP56192 900 aaKnown RBP22.4■■□□□ 1.18
SCARB1-211ENST00000546215 BMS1Q14692 1282 aaKnown RBP22.4■■□□□ 1.18
SCARB1-211ENST00000546215 CCDC40Q4G0X9 1142 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms